| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00957 |
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| Symbol | fliA |
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| ID | 6306113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 2653417 |
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| End bp | 2654172 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642639876 |
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| Product | RNA polymerase sigma factor FliA |
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| Protein accession | YP_001913736 |
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| Protein GI | 188576807 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.651524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACCA CCGCCGCAGC GCAGTACCGT GCCGTCCAGC GCAACAACGC CGACAACGTG
GTAACCCAGC ACGCCGACCT GGTTCGCCGC ATCGCCCACC ACCTGGCCGC GCGTCTGCCG
GCCAGCGTGG AAGTGGACGA TCTGATCCAG GCTGGCATGA TCGGCCTGAT CGAGGCTTCG
CGCAGCTATG ACTCCGAACA GGGCGCCTCG TTCGAAACCT ACGCCTCGAT CCGTATCCGC
GGTTCGATGA TCGACGAAAT CCGCCGCGGC GACTGGGTGC CGCGCTCGGT GCACCGCCGC
GCCCGCGATG CCGCTGCCGC TGTGCGCAAG ATCGAACAGA ACACCGGCCG CGCCGCTGCC
GCCGCCGAAG TGGCCGCCGC AATGGAAATG CCGCTGCCCG ATTACCTGCG TCTGATGGAA
GACGCCGCAC GCGGCCAGGT GCTGAGCCTG GAATCGCGCA TCGAAGATCA CGGCGAGCTG
GACACCACCG CCAAGGGTGG CCCCAACCCG CAGCAGATGA TGGAACGTAG CGAATTCGGC
CGCGAACTGG GCAAGGCCAT CGGCCAATTG CCCGAGCGCG AGCAGCTGGT GCTGTCGCTG
TACTACGAAC AGGAATTGAA TCTGAAAGAA ATCGGCGCCG TGCTCGGTGT CAGCGAATCG
CGCGTCTGCC AGATCCACGG CCAGGCGGTG GTGCGTTTGC GGGGCCGCCT CAAAGTCTTC
GAACTGGCCG ATGCCGGTGT CGAAATTGAC GAATAA
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| Protein sequence | MNTTAAAQYR AVQRNNADNV VTQHADLVRR IAHHLAARLP ASVEVDDLIQ AGMIGLIEAS
RSYDSEQGAS FETYASIRIR GSMIDEIRRG DWVPRSVHRR ARDAAAAVRK IEQNTGRAAA
AAEVAAAMEM PLPDYLRLME DAARGQVLSL ESRIEDHGEL DTTAKGGPNP QQMMERSEFG
RELGKAIGQL PEREQLVLSL YYEQELNLKE IGAVLGVSES RVCQIHGQAV VRLRGRLKVF
ELADAGVEID E
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