Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00949 |
Symbol | |
ID | 6306121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 2660285 |
End bp | 2661667 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642639884 |
Product | ISXo8 transposase |
Protein accession | YP_001913744 |
Protein GI | 188576815 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5659] FOG: Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0119493 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTACAAA TAATCGTATC TTTGTGCCAC TATTGGAAGA CCTTCAGGCC GCGTGGGAGA GCTGTGTTGA ATAGGACACT GGAAGTGCGT TTTGAACAGT ACGGGGAAGT AGTTGCTGCC GCCCTGTCCC ATGCGGATCG CAAACAGCCC GCACACTGGT ACCTGAAGGG GTTGCTACTG CCTGGAGGGC GCAAGAGCGT GGAGCCCATG GCCGCGCGGG TGCACCCGCA GAACGTGCGC TCAGCCCATC AATCGATGCA CCATCTGGTG GCCGATGCCG ACTGGAGCGA TCAAGCGCTG CTGGCGGCGG TGGCGGCACA GGTGCTGCCG ACCCTGAGCA GGAAGAGCGC AGCGTGTCAC TGGATCGTGG ACGACACGGG ATTTTCAAAG AAGGGGGTGC ATTCGGTCGG TGTTGCACGC CAGTACTGCG GCCGCCTTGG CAAGACGGAC AATTGCCAGG TTGCCGTGAG TTTGTCGATC GCCAACGAAC ACGGCAGCCT GCCAGTGGGC TATCGGCTGT ATCTTCCCGA GCAGTGGGCT CAGGATACTG TGCGGCGCAA GAAGGCAGGC GTTCCGGATC AGGTCGTGTT TCAGACCAAG ACAGCGCTGG CCATGGATCA GATCGACAGC GCGCTGGCGA CAGGGATTGC GGCAGGCGTC GTGCTAGCCG ATGCGGCCTA CGGCACCGAG ACCCACTGGC GAGATCAGCT CAGCGAACGC GGCCTGCTGT ACATGGTTGG CGTCCGCAGC AACACGAAGG TCTGGTGGGG ATCGCACCAA CCTGCGCCCA TGCCGCCAGC CAGCCCTAAG GGCAGTCGGC CCCGCACACG ACCGATGCGC GATAGCGCAC ATGCGCCGAT CTCGGTACAT GAAGTCGCGC AGAGCTTGCC CGCAAGGACG TATCGGCAGA TCAGCTGGCG CCAGGGCAGC GACGCAACGC TCAGTTCGCG GTTCGCGGCG GTGCGGGTTC GTGCCGCACA CAATCGCCAG GCACATGACG AGCAGTGGCT GCTGATCGAG TGGCCGCCGG GAGAGTCCGA GCCCCGCCAC TACTGGTTCT CGACGCTACC AAAGCAAACG CCGGTCAAGA CACTGGTTGC CACGGCACAA GGCCGATGGC GGATTGAACG CGATTATCAG GAGCTGAAGT CGGAGTTGGG CCTGCATCAC TATGAAGGGC GCAACTGGCG TGGTTTTCAC CATCACGCCA GTCTGTGCAT CGCCGCATAC GGGTTCTTGA TGCGCGAGCG CCTGCGCAGT AAAAAAAAGT CCGTCGCATT CAAGATGCCT GCAGTATCCA AAAGCGTCCG CCCGCGCCGG TCTGGCCCCA ATGCAACGTC ACCATCCCAA CTCGATTGCC ACGCTGGCCT TCGGACTGGC TAG
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Protein sequence | MLQIIVSLCH YWKTFRPRGR AVLNRTLEVR FEQYGEVVAA ALSHADRKQP AHWYLKGLLL PGGRKSVEPM AARVHPQNVR SAHQSMHHLV ADADWSDQAL LAAVAAQVLP TLSRKSAACH WIVDDTGFSK KGVHSVGVAR QYCGRLGKTD NCQVAVSLSI ANEHGSLPVG YRLYLPEQWA QDTVRRKKAG VPDQVVFQTK TALAMDQIDS ALATGIAAGV VLADAAYGTE THWRDQLSER GLLYMVGVRS NTKVWWGSHQ PAPMPPASPK GSRPRTRPMR DSAHAPISVH EVAQSLPART YRQISWRQGS DATLSSRFAA VRVRAAHNRQ AHDEQWLLIE WPPGESEPRH YWFSTLPKQT PVKTLVATAQ GRWRIERDYQ ELKSELGLHH YEGRNWRGFH HHASLCIAAY GFLMRERLRS KKKSVAFKMP AVSKSVRPRR SGPNATSPSQ LDCHAGLRTG
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