Gene PXO_00926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_00926 
Symbol 
ID6305911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp2439810 
End bp2440568 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content67% 
IMG OID642639676 
ProductD-beta-hydroxybutyrate dehydrogenase 
Protein accessionYP_001913536 
Protein GI188576607 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0885199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAGCA TCCTGATCAC CGGCGCGGGC AGCGGCATTG GCGCCGGTAT CGCCACCCAA 
TTGGCGACCG ACGGCCATCA CCTGATCGTC AGCGATATGG AACTGGCGGC CGCCGAGCGC
ACGGCGCATG CGCTGCGCCA GGCTGGCGGC TCGGCCGAGG CGCTGGCGCT GGATGTCACC
GACGCAGACA GCATCGCGCA GGCACTGGCC AGCGCATCCC GCGCCCCGCA AGTGCTGGTG
AACAATGCCG GCCTGCAGCA CGTGGCCGCG CTGGACGAGT TCCCGATGCA GCAGTGGGCG
CTGCTGGTGG ATGTGATGCT TACCGGGGCC GCACGCCTGA GTCGCGCCGT GCTGCCCGCT
ATGCGCGCGG CCGGCTATGG CCGCATCGTC AACATCGGCA GCATCCACTC GCTGGTCGCC
AGTCCGTACA AGAGCGCGTA TGTCGCTGCC AAACATGGCC TGGTCGGCCT GGCCAGGGTC
ATCGCCCTGG AAACCGCCGA CTGCGACATC ACCGTCAACA CGCTATGCCC CAGCTATGTG
CGCACGCCGC TGATGGAGCG GCAGATTGCC GATCAGGCAC GCACCCGCGG CATCGCCGAA
GACGCGGTGA TCCGCGATGT GATGCTCAAA CCCATGCCCA AGGGCGCCTT CATCGACTAC
GACGAGTTGG CCGGCACGGT GGCGTTTCTG ATGTCGCATG CCGCGCGCAA CATCACCGGG
CAATCCATCG CCATCGATGG CGGCTGGACG GCGCAATAA
 
Protein sequence
MRSILITGAG SGIGAGIATQ LATDGHHLIV SDMELAAAER TAHALRQAGG SAEALALDVT 
DADSIAQALA SASRAPQVLV NNAGLQHVAA LDEFPMQQWA LLVDVMLTGA ARLSRAVLPA
MRAAGYGRIV NIGSIHSLVA SPYKSAYVAA KHGLVGLARV IALETADCDI TVNTLCPSYV
RTPLMERQIA DQARTRGIAE DAVIRDVMLK PMPKGAFIDY DELAGTVAFL MSHAARNITG
QSIAIDGGWT AQ