| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00894 |
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| Symbol | |
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| ID | 6305942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 2473511 |
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| End bp | 2474689 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642639706 |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | YP_001913566 |
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| Protein GI | 188576637 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0775107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTTTC TGACCGAGTG GATCTGGTTC TTTCTGTTTG TGCCACTGGC CGCGCTGGGC
GGCTGGATCG TCGGTCGTCG TGGCGGTCAG CGTCATGGCG ACACGCAGGT CAGTCGTCTT
TCCAGCACCT ATTTCCGTGG GTTGAACTAT CTGCTCAACG AGCAGCCGGA CAAGGCGATC
GAGCTGTTCC TGCATATCGC CGAACTGGAC AAGGAAACCT TTGAGACCCA GGTCGCATTG
GGGCATTTGT TCCGTCGCCG CGGTGAAGTG GATCGTGCGA TCCGCCTGCA CCAGGGCCTG
GTGCAGCGTG GCGACCTGAC CGATCAGCAG CGCGTCCAGG CCCTGCTGGC ACTCGGCGAG
GATTACATGA AGTCCGGGTT GCTGGACCGT GCCGAAACGG TGTTCACCGA ACTGGCGCAG
CTGGACCAGC GTGCACCGCA AGCGTTGCGT CACCTGATCG GCATCTATCA GGCCGAGCGC
GATTGGGAAA AGGCAATCGA CAACGCCACC CGCTATGAAC AAGTGACCGG CGAGCCAATG
GGCAAGCTGA TCTCCCAATT CGAATGCGAA CTGGCTGACC GCAATCGTGG CCTGGGCAAG
ACCGACGATG CGTTGCAGGC GATCGCACGT GCCTACCAGG CCGATGGCAC CTCCGTGCGC
GCCGGTATTT TGGAAGGGCG CATCGAAGCC GAGCGCGGTC ACGATGAAGC GGCGGTGCGC
GCATTCGAGC GTGCAGCCCG GCACGATCCG GAATACCTGC CGGAGATCAT TCCTGCGTTG
ATGGCTGCGT ATCGGCGGGT CGGCGATATC TCAGGGGCGC GCAATTTCTT GTCAGAAATG
ACCGAGCACT ATCGCGGCAT CGCGCCGGTG CTGGCGCTGA CCCAGCTGAT CGAGGCCCAG
GATGGCGTGG CGCCTGCGCT GGCCTATCTC GGCCGACAGC TCAAGGATCG CCCGTCGGTG
CGTGGTGAAT CGGCGTTGAT CGACCTCACC CTGGCCGAGG GAAGCGACCC GGTCGGGACG
CTGCAAGACC TCAAGCACAT CACCGACCAG TTGCTGGTGC GCAATCCGAG CTATCGGTGC
ACGCGCTGCG GCTTCGGGGC CAAGACGCAC CACTGGCAGT GCCCGAGCTG CAAGGAGTGG
GGTACGGTCA AACCGTTGTT GAACTACGCG GTGGTCTGA
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| Protein sequence | MDFLTEWIWF FLFVPLAALG GWIVGRRGGQ RHGDTQVSRL SSTYFRGLNY LLNEQPDKAI
ELFLHIAELD KETFETQVAL GHLFRRRGEV DRAIRLHQGL VQRGDLTDQQ RVQALLALGE
DYMKSGLLDR AETVFTELAQ LDQRAPQALR HLIGIYQAER DWEKAIDNAT RYEQVTGEPM
GKLISQFECE LADRNRGLGK TDDALQAIAR AYQADGTSVR AGILEGRIEA ERGHDEAAVR
AFERAARHDP EYLPEIIPAL MAAYRRVGDI SGARNFLSEM TEHYRGIAPV LALTQLIEAQ
DGVAPALAYL GRQLKDRPSV RGESALIDLT LAEGSDPVGT LQDLKHITDQ LLVRNPSYRC
TRCGFGAKTH HWQCPSCKEW GTVKPLLNYA VV
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