Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00879 |
Symbol | |
ID | 6305959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 2489822 |
End bp | 2491399 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642639723 |
Product | hypothetical protein |
Protein accession | YP_001913583 |
Protein GI | 188576654 |
COG category | [S] Function unknown |
COG ID | [COG5368] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.173118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTGGGCG CGTTGGTGCT GGCCTCGTGC AAGCAAGCCG AGGAACCCAA GGTGGCCGAA AAGAAGGCGC CGGTAAAAGT CATCCTGGTC GAGGCGCAAC TGCCGCCCAA GCCGGTCAAG CCGCCGCTGC CGCCGCTGTT TTCGGACATC GAACGCCGCA CGTTCCAGTT TTTCTGGGAC ACCGCCAACG AACTCAATGG ACTGGCGCCG GATCGGTTTC CGTCGCGGCC ATTCGCCAGC ATTGCGTCGG TGGGATTTGC GCTCACCGCG TATCCGATCG GCATTGAAAA CGGATGGATC AGTCGCAATC AGGCGATCGA CCGCACCCTG ACCACGCTGA AATTCTTCCG CGATGCGCCG ATGGGGCCGC AGAAGACCGG TCGGGCCGGC TACAAAGGCT TCTACTACCA TTTTCTGGAC ATGCAGCAGG GCAACCGCTA CGACAGTTGG GTTGAACTGT CGAGCGTGGA CACCGCACTG CTGATGATGG GCGTGCTGTT CACCCAGTCG TATTACGACG GTGAGGACCC GCGCGAAAAA GAGATACGCC AGATCGCCGA CACGCTTTAC AAGCGCGTGG ACTGGCGCTG GCTGCAACCG CGCGCGCCGC TGATCTCGAT GGGCTGGTTC CCCGAAAGCG GCTTCATCAA CCACGATTGG ATGGGCTACA ACGAGGCGAT GATGCTGTAT ATCCTCGCGC TGGGCTCGCC GACGCATGGC GTCGACCCGG ACGCTTGGAC CAGCTGGACC CGCACCTACA ACAACGACTG GGGCGTGTAT CAGGGCCAGG AATACCTCTC GTTCGGCCCG TTGTTCGGCC ACCAGTACAG TCATGTCTGG ATCGACTTCC GCGATATCCA GGACCAATAC ATGCGCGAAC GCGGCATCGA CTACTTCCTC AATAGCCGCC GCGCCACGTT GGCCCAGCGC GATTACGCCA TCGACAACCC AATGAAATGG AAGGACTACA GCGAAAACGT CTGGGGCCTC ACCGCCAGCG ACGGCCCGCA GAACACCAGC CAGCAATACC GGGGCGAGCA GCGCCAGTTC CGCCATTACT CCTCACGCGG CGCCGGCCTG CGCGAGAATT TCGACGACGG CACCATCGTG CCGTCGGCGG CCATCTCCTC GATCGTGTTC GCCCCGGAAG TGGTGATCTC GGCCACCGAG GAAATGCACA AGCGCTATGG CGACTTCCTG TATTCCAGCT ACGGCTTCCT GGATTCGTTC AACCCCAGCT TCAACTACGA CATCCCGCTC AAGACCGGGC GCATGGTGCC GGATCGTGGC TGGGTAGCCA GCGACTACAT CGCCATCGAC CAGGGCCCGA TCCTGGCGAT GATCGCCAAC TACCAGAACG AATTCGTCTG GAACGTCATG AAGAAGAACC CTTACATCCG CGCCGGTCTG GAACGCGCCG GCTTCACCGG CGGCTGGCTC ACCCCGGAAG GCGAGCCGCA GCCGGCGCCG CAGAAGGACG AGCAGAAGGC GGCCGCGCGC GCGCTGGGCA TGGCCGAGTC GCGTGCCGCC GCCGCCCAGG TCCAGCAAGA CCCCACGCAA CGCCAAAAAC CCGAGTAA
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Protein sequence | MLGALVLASC KQAEEPKVAE KKAPVKVILV EAQLPPKPVK PPLPPLFSDI ERRTFQFFWD TANELNGLAP DRFPSRPFAS IASVGFALTA YPIGIENGWI SRNQAIDRTL TTLKFFRDAP MGPQKTGRAG YKGFYYHFLD MQQGNRYDSW VELSSVDTAL LMMGVLFTQS YYDGEDPREK EIRQIADTLY KRVDWRWLQP RAPLISMGWF PESGFINHDW MGYNEAMMLY ILALGSPTHG VDPDAWTSWT RTYNNDWGVY QGQEYLSFGP LFGHQYSHVW IDFRDIQDQY MRERGIDYFL NSRRATLAQR DYAIDNPMKW KDYSENVWGL TASDGPQNTS QQYRGEQRQF RHYSSRGAGL RENFDDGTIV PSAAISSIVF APEVVISATE EMHKRYGDFL YSSYGFLDSF NPSFNYDIPL KTGRMVPDRG WVASDYIAID QGPILAMIAN YQNEFVWNVM KKNPYIRAGL ERAGFTGGWL TPEGEPQPAP QKDEQKAAAR ALGMAESRAA AAQVQQDPTQ RQKPE
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