Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00873 |
Symbol | scpA |
ID | 6305965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 2497280 |
End bp | 2498119 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642639729 |
Product | segregation and condensation protein A |
Protein accession | YP_001913589 |
Protein GI | 188576660 |
COG category | [S] Function unknown |
COG ID | [COG1354] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.447056 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGCTGG CGGTGGTGCA TGGGCAACCG GTGCTGCAGA TCCCGCAGGA TCTGTATATC CCGCCGGACG CGTTGGAAGT CATCCTGGAT GCCTTCGAAG GTCCGCTGGA TCTGCTGCTG TACCTGATCC GCCGGCAGAA CCTGGACATC CTGGACATCC CCGTCGCCGA GATCACCCGG CAGTACGTGG CTTACATCAA TGTGATGCAG GAGCTGCGCT TCGAACTGGC CGCCGAATAT CTGGTGATGG CCGCGATTCT GGCCGAGATC AAATCGCGCA TGCTGTTACC GCGCCCGCCA AGCCAGGATG GCGAAGAGGA CGATCCGCGC GCCGAACTGG TCCGCCGGCT GCAGGAATAC GAACGCTTCA AGCAGGCCGC CGAAGATCTG GACACCCTGC CCCGCATGGG CCGCGACAGC GCGCCGGTGC AGGCCCATCT GCCCGAGCGC GCGGCGGTCA AGCTGCCGCC GCCGGTGGAA CTGAAAGAAA TGCTGATGGC GCTGTACGAC GTACTCAAGC GCGCCGAGCT GTTCACCGGC CATGCGATCA AGCGCGAGGC ACTGAGCGTG CGTCAGCGCA TGGGCGATGT GCTGAGCCGT CTGGACGATG GCAAGTTCTA CCGTTTCGAA TCGCTGTTCA CGGCCGAAGA AGGCAAGCTC GGCGTGCTGG TCACTTTCCT GGCGCTGCTC GAATTGGCCA AGGAGCAGTT GCTGGACATC GTGCAGGAAG CGCCGCTGGC GCCGATCTAC GTGAAGTCGC TGGCGTTGGG CAATACCAAT GCGCCGTTGC AATTCTCCAG CGAATTCGAC GACAGCGATG CCGCCAACGA GCCCCTCTGA
|
Protein sequence | MPLAVVHGQP VLQIPQDLYI PPDALEVILD AFEGPLDLLL YLIRRQNLDI LDIPVAEITR QYVAYINVMQ ELRFELAAEY LVMAAILAEI KSRMLLPRPP SQDGEEDDPR AELVRRLQEY ERFKQAAEDL DTLPRMGRDS APVQAHLPER AAVKLPPPVE LKEMLMALYD VLKRAELFTG HAIKREALSV RQRMGDVLSR LDDGKFYRFE SLFTAEEGKL GVLVTFLALL ELAKEQLLDI VQEAPLAPIY VKSLALGNTN APLQFSSEFD DSDAANEPL
|
| |