| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00859 |
|---|
| Symbol | |
|---|
| ID | 6305979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 2510971 |
|---|
| End bp | 2511531 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642639743 |
|---|
| Product | C-type cytochrome biogenesis protein/thioredoxin |
|---|
| Protein accession | YP_001913603 |
|---|
| Protein GI | 188576674 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.00856389 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGCGCCA TCGTGCTGCT GCTCGCCCTG GCAGCACTGT TGGTCTATGC GGTGGTGCGC
TCCGGTCAGG ACGATCGCGA TGCCCTGCCC TCTGCCCTGA TCGGCAAACC TGCGCCCGAA
TTCGCGCTGC CGCTGCTGCA CGATCCCAGC ATCGTGGTGC ATGCGCGCGA GCTGCGTGGC
GCGCCGTACA TCATCAACGT GTGGGGCAGT TGGTGCCCGG CCTGCCGCGA AGAACACCCG
GTGCTGAGCC GCTTCGCGCT GACCAAGCGC GTGCGCGTGA TCGGCTACAA CTGGAAGGAC
GAGCGCAATG ATGCGCTGCG CTGGCTCGAA CAACTCGGCA ATCCGTATCT GCTGGTGGTC
GCCGATCAAG ATGGACGCAC CGCGATCGAT TTCGGCATCG CCGCCGCGCC GGAAACCTTT
CTGATCGACG GGCGCGGCGT GGTGCGCTGG AAGTACAGCG GCATGCTGAC CCAATCCATC
ATCGACACTC AGCTGATTCC GGCGCTGAGC AAGATCGAAC GCTCACCCAC CGCCGCACCG
GACCTGCACG CCAAACAATG A
|
|---|
| Protein sequence | MGAIVLLLAL AALLVYAVVR SGQDDRDALP SALIGKPAPE FALPLLHDPS IVVHARELRG
APYIINVWGS WCPACREEHP VLSRFALTKR VRVIGYNWKD ERNDALRWLE QLGNPYLLVV
ADQDGRTAID FGIAAAPETF LIDGRGVVRW KYSGMLTQSI IDTQLIPALS KIERSPTAAP
DLHAKQ
|
|---|
| |