Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00855 |
Symbol | |
ID | 6305983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 2513262 |
End bp | 2515133 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642639747 |
Product | hypothetical protein |
Protein accession | YP_001913607 |
Protein GI | 188576678 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00443533 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGTCTGC GCTGGCGGTG CGGTTGGCTG CTGCTGGCCG CCTTGATCGC AACGCAGGCG CAGGCCGAAC TGTTGGTCGA GTTTGTTGCG TCGGACTTGC GTCAGGCTGA GATCGAGGCG AGCAACGCAC TGGTGCAGCA GGTTGCCCAG CGACTGCCGC AGGGCTGGAC GCAGCGGCTG ACCGCACCGA TCCAGCTGCA ATGGCGTACC GATCTGCCGG CGCAGGTACA TGGCCGTGCA ATCGGCAATC GTGTCCTGCT CGATCGCGCG CTGCTGCAGG TGTGGAGTGC GCAGCCCGAA GATGCACGTG CCGATCGCAA CGCGCCAGCC ACGCGCGCAG CGATGGCGGC GCTGATACAC GAATTGGCGC ATGTGCTCGA TCGCGGTGCA CATGGCGCTT TGTCGGGCGA TCCGCGCCTG CGCGATCTTG CCGGTTGGCA GGTGCGGCCG TGGCGGGTGG GGCGCAGCGA AAATCAGTTC AGCCACCGCA GCCCGGACGA ATACGAGCGC CGCAGCCCGG CCAAGTTTGT CGCGGTCAAT CTTGAGCATT ACGTACTGGA TGCCGACTAT GCCTGCCGAC GTCCCGCGCT GGCGGCCTGG TTTGCGCAGC GTATCGGTCC AACGCAGGGT GCTGTGCCAT GCGAGACCGC GCTGCCGTAT CTGCAAGCCG ACAACGATGC CGGTGCGATG TCGTTGCTGG CGCTGGATCC GGCACGCGTG TACGCGGTGG ACTATCTGCT TGCCGAGGGC AACGAGCAGC CGATGAGCCG CTGGGGCCAT AGCATGTTGC GGCTGGTGAT CTGTGCACCC GGCCGTGCAC CGGGTCCGGC ATGCCGGCTG GATCTGCAGT ACCACCGCGT GCTGTCGTTC CGCGCGTTCG TGGGCGATGT GCAGATTTCC AGCTGGCGCG GGCTCACTGG CTCGTATCCA TCGCGGCTGT TCGTGCTGCC GTTGAATCAG GTCGTCGACG AATACACCAA GGTGGAACTG CGTGCCTTGT CGTCGGTGCC GCTGACCCTG ATGCCCGATG AGATCGCTGC GCTACTGACG CGTGCCGCGC AAGTGCATTG GAGCTACGAC GGGCGCTATT ACTTCATCGG CAATAACTGC GCGGTGGAAA CCTTCAAGTT GCTGCACGAC GGGGTGCCAC GTCTGGCTGC AGCCAAGTTG GCGTCGATCA CGCCGCGCGG GGTGCGGCAA CGCTTGCAGC GCTCGGGTAT CGCCGATACG CGGGTGCTGG ACGATCCTGC TCAGGCGATC CGCCAGGGCT ATTACTTCGA ATCGGCCGCT GCGCATTACC AGGCCATGTT CGATGTGCTT CGACGCGGTA TCGCGGTGCC GCACACAACG GTTTCGCAGT GGCTGGATGC AGCGCCTGCC GCACGGGCGC AATGGTTCGA CCGTGGTGGT CTGCGCGAAA CTGCAGCGGC CTTGTTGCTG GAGCAGGCGG CATTGCGCCG TCGCGAACTG CTGGCGCGCG ATGCGCTCAA GCGCCTGCTG CAACCGGGCG TGGTCGCGCG CGACACGGTG CAGGGACAGT TGCAATCGCT GTTCGCGCGT GAAGCCCAAC TCAGCCATCC GGCGATGTTG TTGGGTGGTA CCGGCTACGG CGTGCCGCAG GCAGACGAGC AGCAACAGCT GAGCGCGCGC GTGGCGCAGG AAAGCGATGT GCTGATCAGT GGCTGGAAGC AGCTGCAGAC GCTGGGACGC CAGCAGTTGC CGGCCGATCT GCGCATTGGA TTGGAGCAGG GCAAGGCGAA TGTGGCGCAT TTGCGTGCGC GCCTGCGCGT GCTTGCGCGC GGTGATGCGG CCGCCGACAA AGCGCAATCG GATATTCACA TCCCTATGCA GGCGCGACGA GTGCCTCAAT GA
|
Protein sequence | MSLRWRCGWL LLAALIATQA QAELLVEFVA SDLRQAEIEA SNALVQQVAQ RLPQGWTQRL TAPIQLQWRT DLPAQVHGRA IGNRVLLDRA LLQVWSAQPE DARADRNAPA TRAAMAALIH ELAHVLDRGA HGALSGDPRL RDLAGWQVRP WRVGRSENQF SHRSPDEYER RSPAKFVAVN LEHYVLDADY ACRRPALAAW FAQRIGPTQG AVPCETALPY LQADNDAGAM SLLALDPARV YAVDYLLAEG NEQPMSRWGH SMLRLVICAP GRAPGPACRL DLQYHRVLSF RAFVGDVQIS SWRGLTGSYP SRLFVLPLNQ VVDEYTKVEL RALSSVPLTL MPDEIAALLT RAAQVHWSYD GRYYFIGNNC AVETFKLLHD GVPRLAAAKL ASITPRGVRQ RLQRSGIADT RVLDDPAQAI RQGYYFESAA AHYQAMFDVL RRGIAVPHTT VSQWLDAAPA ARAQWFDRGG LRETAAALLL EQAALRRREL LARDALKRLL QPGVVARDTV QGQLQSLFAR EAQLSHPAML LGGTGYGVPQ ADEQQQLSAR VAQESDVLIS GWKQLQTLGR QQLPADLRIG LEQGKANVAH LRARLRVLAR GDAAADKAQS DIHIPMQARR VPQ
|
| |