| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00800 |
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| Symbol | ispG |
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| ID | 6305898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 2427370 |
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| End bp | 2428509 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642639663 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_001913523 |
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| Protein GI | 188576594 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00688944 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAACA CCGACACTGC CGACATTGCC GGCAGCGTCA AGCAGGTGGC CGATCTGTGG
CGCGCCGGCT CGGAAATGGT GCGCCTGACC GTCAACAACG CCGAGTCCGC TGCCGCCATC
CCGCGCATCG TCGACAAGCT GCGCATGATG GGCATCGACG TACCGTTGAT CGGCGACTTC
CATTACAACG GCCACCAGTT GCTGGCGGCA GAGCCGGCCT GCGCCGAGGC GCTGGCCAAG
TACCGCATCA ATCCCGGCAA TGTCGGTTTC GGCAAGAAGA AGGATCTGCA GTTCGGTCAG
TTGATCGAAT GTGCGATCAA GTACGACAAA CCGGTGCGCA TCGGCGCTAA CTGGGGCTCG
CTGGACCAGT CGCTGGCCGC GCAGCTGATG GACGAAAACG CGCAGCGCGA AACGCCCTGG
GATGCCGGCC GGGTGCTGCG CGAGGCACTG ATCCGCTCGG CCTTGGATTC GGCCGAGCGT
GCGGTGGAGC TGGGCCTGCC GCGTGAGCGC ATCATTCTGT CGGCCAAGGT GTCCGGCGTG
CAGGAGTTGA TTGCGGTGTA TCGCGACATG GCCAGTCGCT GCGATTTCGC GTTGCATCTG
GGCCTGACCG AAGCCGGGAT CGGCAGCAAG GGCATCGTGG CCTCGGCGGC GGCACTGAGC
GTGCTGTTGC AGCAAGGCAT CGGCGACACC ATCCGTATCT CGCTGACCCC AGAGCCGGGG
CAGTCGCGCA CTCACGAAGT GATCGTCGCG CAGGAACTGC TGCAGACCAC CGGCCAGCGT
GCGTTTACGC CGATGGTCAC CGCCTGTCCG GGCTGCGGCC GCACCACCTC CGAGTTCTTC
CAGGAGCTGG CCGGGGTGGT GCAGAACCAT GTGCGCGCCA AGATGCCGGA ATGGAAGATC
ACCAATCCCG GCGCCGAGAA CATGACGCTG GCGGTGATGG GCTGCGTGGT CAACGGACCA
GGCGAATCGC GCCACGCCAA TATCGGTATT TCGTTGCCGG GTACCGGCGA GGCGCCATCC
GCGCCAGTGT TCATCGATGG CGAAAAAAGC GTCATCCTGC GCGGCGAAAA CATCGCTCAA
GAGTTCATTG GCCTGATCGA TCAATACGTC GAACGCACCT ATGCCCGCCG CGCCGGCTGA
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| Protein sequence | MTNTDTADIA GSVKQVADLW RAGSEMVRLT VNNAESAAAI PRIVDKLRMM GIDVPLIGDF
HYNGHQLLAA EPACAEALAK YRINPGNVGF GKKKDLQFGQ LIECAIKYDK PVRIGANWGS
LDQSLAAQLM DENAQRETPW DAGRVLREAL IRSALDSAER AVELGLPRER IILSAKVSGV
QELIAVYRDM ASRCDFALHL GLTEAGIGSK GIVASAAALS VLLQQGIGDT IRISLTPEPG
QSRTHEVIVA QELLQTTGQR AFTPMVTACP GCGRTTSEFF QELAGVVQNH VRAKMPEWKI
TNPGAENMTL AVMGCVVNGP GESRHANIGI SLPGTGEAPS APVFIDGEKS VILRGENIAQ
EFIGLIDQYV ERTYARRAG
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