| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00775 |
|---|
| Symbol | |
|---|
| ID | 6305615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 2145872 |
|---|
| End bp | 2146447 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642639383 |
|---|
| Product | N-acetylmuramoyl-L-alanine amidase, putative |
|---|
| Protein accession | YP_001913250 |
|---|
| Protein GI | 188576321 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0341062 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGATG CCGTCCTGCC GTCGCCACCG ATCACCTACG CGCCGCTGTC CTACGAATCG
CGGTTGACAA CACGCGCGCT CACCCAGATC GACATGGTGG TCATCCATTG CACCGAGTTG
CCGGACATGG CGATGGCGCG CGAATACGGC GAGCGTGTGC TCTACGACAG CGGCACCGGC
AACAGCGGGC ATTACTACCT CGATCGCAAC GGCAGCATCC AGCAATACGT CGCGCTGGAG
CGCGTTGCGC ACCATGTGCG TGGGCATAAC CTACATACGC TGGGGATCGA ACTGGTCAAC
CGCGGCCGCT ATCCCCACTG GCTGGATTCG CGTCATCAAG AAATGACCGA ACCGTATCCC
GAAGCGCAGA TCGCTGCGCT GATCAGCTTG TTGCAATGGC TGCAGCAGCA ACTGCCTTCG
GTGCGACGCA TCGCCGGCCA CCAAGCGCTG GATACCACCC AGGAAGCGGC CAGCGACGCC
CCGGAGCGCA ACATTCAGCG CAAACTCGAT CCTGGCCCGT TGTTTCCGTG GCCGCGTATC
GAGGCGGCGG TAAGCTGGTC GCACACGCCA GGTTAA
|
|---|
| Protein sequence | MSDAVLPSPP ITYAPLSYES RLTTRALTQI DMVVIHCTEL PDMAMAREYG ERVLYDSGTG
NSGHYYLDRN GSIQQYVALE RVAHHVRGHN LHTLGIELVN RGRYPHWLDS RHQEMTEPYP
EAQIAALISL LQWLQQQLPS VRRIAGHQAL DTTQEAASDA PERNIQRKLD PGPLFPWPRI
EAAVSWSHTP G
|
|---|
| |