| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00768 |
|---|
| Symbol | rlmL |
|---|
| ID | 6305620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 2149996 |
|---|
| End bp | 2152131 |
|---|
| Gene Length | 2136 bp |
|---|
| Protein Length | 711 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642639388 |
|---|
| Product | 23S rRNA m(2)G2445 methyltransferase |
|---|
| Protein accession | YP_001913255 |
|---|
| Protein GI | 188576326 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase
[COG1092] Predicted SAM-dependent methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.192916 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAATTCT TCGCATCCTG CGCCAAGGGC CTGGAATACC TGCTTGCCGA CGAACTGCTT
GCGCTCGGTG CCAGCAAGGC CACCGCCACT ATCTCCGGCG TCAACGTCGA AGGCGAACTG
CGCGATGCCC AGCGCGCCGT GCTGTGGTCG CGCCTGGCCA GCCGCGTGCT GTGGCCGCTG
AGCGAGTTCG ATTGCCCGGA CGAAGACGCG CTGTACGCCG GCGTGGCCGA GCTGCCGTGG
GACGCGCATC TGTCGGTGGG GCACACGCTG TCGGTGGACG CGCATGTGTC CGGCACCGCG
ATCACGCACG CCCGCTACGC AGCGCAGCGC ATCAAGGACG CGGTGGTGGA CACCATGCGC
CGGCAGGGGC TGGAGCGCCC GTCGGTAGAC GTGGAAAGCC CGGACCTGCG CCTGAATTTG
TCGCTGCGTA AAGGCCGCGC CACCATCTCG GTGGACCTGG GTGGAGGCCC GCTGCACCGG
CGCGGCTGGC GCATGGCGCA GAACGAGGCG CCGTTGAAGG AAAACCTGGC CGCAGCGGTG
CTGATGCGCG GCGGCTGGCC GCGCGCCTAT GCCGATGGCG GCGGCTTGCT GGATCCGATG
TGCGGCAGCG GCACGCTGCT GATCGAAGGC GCGCTGATGG CCGCCGACGT CGCGCCCGGT
CTGCAGCGTT ACGGCAGCGA TCTGCCCAGC CGCTGGCGCG GCTTCGACCG CAACGGCTGG
CAGCAACTGG TCAGCGAAGC GCGCGAACGC GACAGCGTCG GCCGCGCCGC GCTCAAGCAG
GTGATCCACG GCAGCGACAT GGACCCGCAT GCCATCCGCG CTGCGAAAGA GAATGCGCAA
GTGGCCGGCG TGGCCGAGGC GATCTGGTTC GGCGTGTGCG AGGTCGGCGA GTTGCAGACG
CCACCGCAGG CCACCGGCGT GGTGGTGTGC AATCCGCCCT ATGACGAGCG CTTGGCCGCC
GATGCGGCGC TGTATCGGCG CCTGGGCGAT ACCTTGCAGT GCGCCGTGCC TCAATGGCGC
GCGAGCCTGC TGTGCGGCAA TGCCGAGCTG GCGTATGCCA CCGGCCTGCG CGCGGGCAAG
AAATACCAGC TGTTCAACGG CGCGATCGAA TGCGCGTTGA TCGTCTGCGA CCCGATCGCA
GTGCCGCGAC GCACCCCGCT GGCGGCACCC ACCGCGCTCA GCGAAGGCGC GCAGATGGTG
GCCAATCGGC TGCGCAAGAA TCTGCAGAAA TTCAAGAAGT GGCGCGCGCG CGAAGGCGTC
GAATGCTTCC GCGCCTACGA CGCCGATTTG CCGGAATATT CTGCCGCCAT CGACGTGTAC
CAGCAAGCCG ACGGCGACCG GCGCATCTTC CTGCATGTGC AGGAATACGC AGCGCCAGCG
ACGATTCCCG AGGCCGATGT GCGCCGTCGT CTCAACGAAC TGCTGGCCGC CGCACGCGAG
GTCTTCGAGG TACCGGCCGA GCGCGTGGCG CTGAAGTCGC GCGAACGCGG CAAGGGCGGC
AGCAAGTACG GTCGCTTCGA ACAGCGCAAC GAAATCGTCC ACGTGCGCGA ACACGGCGCG
TTGCTGCGCG TGAACCTGTT CGATTATCTG GATACCGGGC TGTTCCTGGA CCACCGCCCG
CTGCGTGGCA CCATGGCGCA GCAGAGCAGG GGGCGCCGCT TTCTCAATTT GTTCTGCTAC
ACCGGCGTGG CCAGCGTGGA AGCGGCCGTG GCCGGTGCGG CGTCCACCAC CAGCGTGGAT
CTGTCGGGAA CATACCTGCA GTGGTGCGCC GACAATCTCG CGTTGAACGG GCTGGCCGGC
AGCAAGCACA AGCTGGTGCA GGCCGATGCA TTGGCCTGGC TGGAAGCCGA ACGCGCGCAT
TTCGACGTCA TTTTTTGCGA CCCGCCAACC TTCTCCAACT CTGCGCGCGC GGAAGATTTC
GATATCCAGC GCGCGCATGT GCGTCTGTTG CGTGCGGCCG TGGCACGGTT GGCGCCTGGC
GGCGTGTTGT ATTTCTCCAA CAACTTTCGT CGCTTCAAGC TGGATGAGGA AGGGGTGGCG
GAGTTCGCGC AGTGCGAGGA CATCAGCCCG CGTACCATCG ACCCGGATTT CGAGCGGCAT
GCGCGGATTC ACCGTGCCTG GCGGTTGACG GCCTGA
|
|---|
| Protein sequence | MKFFASCAKG LEYLLADELL ALGASKATAT ISGVNVEGEL RDAQRAVLWS RLASRVLWPL
SEFDCPDEDA LYAGVAELPW DAHLSVGHTL SVDAHVSGTA ITHARYAAQR IKDAVVDTMR
RQGLERPSVD VESPDLRLNL SLRKGRATIS VDLGGGPLHR RGWRMAQNEA PLKENLAAAV
LMRGGWPRAY ADGGGLLDPM CGSGTLLIEG ALMAADVAPG LQRYGSDLPS RWRGFDRNGW
QQLVSEARER DSVGRAALKQ VIHGSDMDPH AIRAAKENAQ VAGVAEAIWF GVCEVGELQT
PPQATGVVVC NPPYDERLAA DAALYRRLGD TLQCAVPQWR ASLLCGNAEL AYATGLRAGK
KYQLFNGAIE CALIVCDPIA VPRRTPLAAP TALSEGAQMV ANRLRKNLQK FKKWRAREGV
ECFRAYDADL PEYSAAIDVY QQADGDRRIF LHVQEYAAPA TIPEADVRRR LNELLAAARE
VFEVPAERVA LKSRERGKGG SKYGRFEQRN EIVHVREHGA LLRVNLFDYL DTGLFLDHRP
LRGTMAQQSR GRRFLNLFCY TGVASVEAAV AGAASTTSVD LSGTYLQWCA DNLALNGLAG
SKHKLVQADA LAWLEAERAH FDVIFCDPPT FSNSARAEDF DIQRAHVRLL RAAVARLAPG
GVLYFSNNFR RFKLDEEGVA EFAQCEDISP RTIDPDFERH ARIHRAWRLT A
|
|---|
| |