| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00706 |
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| Symbol | |
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| ID | 6305684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 2219413 |
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| End bp | 2222505 |
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| Gene Length | 3093 bp |
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| Protein Length | 1030 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642639452 |
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| Product | cation efflux system protein |
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| Protein accession | YP_001913319 |
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| Protein GI | 188576390 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0736219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAGT CGATCATCAC CACCTGCTTC CAGCGTCGCG GCATCGTCTG GCTGGTCTTC
GTACTCATTG CGTTATACGG CACATGGAGC TGGACGCAGC TGCCGGTGGA AGCCTATCCG
GATATCGCCG ACGTCACTTC GCAGGTGGTC ACCCAGGTGC CAGGCCTGGG TGCGGAGGAA
GTAGAGCAGC AGATCACCGT GCCGCTGGAA CGTGCGTTGA TGGGCACGCC AGGCCTGCAT
GTGTTGCGCT CGCGCAGCCT GTTCGCGCTG TCGTTAATCA CCTTGGTTTT CGATGACGGG
ACAGAAGGCT ACTTCGCGCG CCAGCGCGTG CTGGAACGCA TACAGGCGGT CACCCTGCCC
TATGGCGCGA TTCCCGGCCT GGATCCGTAT ACCTCGCCCA CCGGCGAGAT TTATCGCTAC
ACGCTGGAAT CGAAAACACG CAGCCTGCGC GAGCTGTCCG ACCTGCAATT CTGGACGGTG
ATTCCGCGCT TGCAGAAGGT GCAAGGCGTG GCCGATGTCA CCAACTTCGG CGGCCTTACC
ACCCAGTTTT CATTGGCACT GGAACCGGAC CGCTTGACGC GGTACGGGGT GTCTTTGCAA
CAGGTCAAGA GCGCCATCAC CAGCAATAAC GCCGATGGCG GCGGTAGCGT GATGGATCGC
GGCGAACAGA GTTACGTGAT CCGCGGCATC GGCCTGCTGC GCTCGTTGCA GGACATCGGC
GATGTGGTGG TCAGCAACAG CAATGGCGTG CCGGTGCTGG TCAAGGATCT GGGCGAGGTG
CGCTACGACA ATGTGGAACG GCGCGGCATT CTGGGCAAGG ACAACAACCC GGACACGATC
GAAGGCATCG CGTTGCTGCT CAAGGACAGC AATCCGTCGG TGGCCTTGCA AGGCATCCAC
AGCGCCGTGG AGGAGCTCAA CAACAGCTTG TTGCCCAAGG ACGTCAAGGT GGTGCCGTAT
CTGGATCGCA CCGCGTTGAT CGATGCAACG CTGCACACGG TGAGCGCCAC GCTCACCGAA
GGCATGCTGC TGGTATGCGT GGTGCTGTTG ATCTTTCTGG GCAGCCCGCG CGCAGCGGCA
ATCGTGTCGC TGACCATCCC GCTGTCGTTG TTGATCGCCT TCATCTTCAT GCACCACCTC
AAGATTCCGG CCAATCTGCT GTCCTTGGGC GCGATCGACT TCGGCATCCT GGTCGATGGC
GCGGTCGTGC TGGTTGAAAA CGTCCTGCGC CTGCGCGAAG AAAACAGCGA GCGTGCGTTG
ACCGCGGGCG ATGCGATCGA CGCCACCTTG CACGTGGCGC GGCCGATCTT CTTCGGCATG
GCCGTCATTG GGTGTGCGTA TCTGCCGTTG CTTGCGTTCG AGCGCATCGA ATACAAACTG
TTTTCACCCA TGGCTTACGC GGTGGGCGCG GCCTTGATCG GTGCGCTGCT GGTGGCATTG
ATGTTGATTC CCGCCCTGGC GTGGCTGGCG TTCCGCAAGC CGCGCAAGAT GATGCACAAC
CGCGTATTGG AAGCACTGGG GCAGCGCTAC CGCGCATTGC TGGAACGTAG CGTTGGCCGA
CGCGGTTGGT TGCTGGCCTG CGCTGCGCTG GCCCTGTGCG TGCTGGCCGT GCTGGGTGGC
AGCATCGGCC GCGACTTCTT GCCGTATATC GATGAAGGCT CGCTGTGGCT ACAGGTGCAG
ATGCCGCCAG GCATCACCCT GGACAAGGCA GCACGCATGG CCAACGCCTT GCGCACGGCC
ACGCTGGAAT TTCCCGAGGT GTCGTACGTG GTGACCCAGA CCGGGCGCAA CGACGATGGC
ACCGACTACT GGACGCCCTC GCATATCGAA GCGAGCATTG GCTTGCGTCC GTACAAAGAC
TGGCCATCGG GCATGGACAA GCAGGGACTG ATCGCTGCGC TTGGCGCGCG TTATGCACAG
ATGCCCGGCT ATACGGTCAG CATGATGCAG CCGATGATCG ACGGCGTGCA GGACAAGCTC
TCCGGTGCAC ACAGCGACCT GACCGTCAAG GTGTTCGGCG ACGACCTGCA ACAGGTCCGT
GGCGTTGCCG AACAGGTGGC TACAGCCTTG CACGCAGTGC CAGGCGCTGC GGATATCGCC
GTGGACGTGG AGCCGCCCCT GCCCAACCTG CAGGTGCGCT TCGACCGGGA TGCGGCAGCG
CGCTACGGCA TCAATGCCGC CGATGTGTCG GATCTGATTG CCACCGGCAT CGGCGGCAGC
CCGATCGGGC AGATGTATAT CGGCGAGAAG AGCTACGACC TCACCGTGCG TTTTCCGCAG
CGGTATCGCA ACGATCCGCG GGCCATTGGC GCGTTACGTT TGCGCACCGC TGCCGGTGCG
GAGATACCGC TATCGGCGGT CGCCAGCATC ACGACCACCA GCGGCCAGAG CGTGATCGTG
CGCGAGATGG GACGGCGCAA CATCATCGTG CGGCTCAATG TGCGCGGCCG CGATCTGTCC
AGTTTTCTCA GCGATGCGCA GGCCACGCTC GTGCGACACG TGCGGATCGA TCCACAGCAC
ATGCAGTTGG TGTGGGGTGG CCAGTTCGAA AACCTGCAGC GTGCCCAGGC CCGCTTGCTG
GTGGTGCTGC CGACCACGTT GTGCATCATG TTCGTGCTGC TGTTCGGCGC GTTCGGCAAC
CTGCGTCAGC CGACATTGGT GCTGGCCGCA GTGCCGCTGG CGATGATCGG CGGGCTGGCT
GCACTGCACC TGCGCGGGAT GACGCTCAAT GTCTCCAGCG CGGTGGGCTT TATCGCCTTG
TTCGGCGTGG CAGTCTTGAA CGCGGTGCTG ATGCTGGCGC AGATCAACCG ATTGCGCCAG
GACCCCGGCA TGTCCTTGCG CGAAGCGGTG GTGGCCGGTG CGGTGAGCCG CATGCGTCCG
GTCCTGATGA CCGCCACGGT GGCAGCACTC GGCCTGACAC CGGCGATGCT CGCCACTGGC
CTGGGCAGCG ATGTGCAACG CCCCTTGGCC ACGGTGGTGG TTGGCGGCTT GGTCACCGCG
ACGGCGCTGA CGCTGCTGTT GTTGCCATCG CTGTACTACC TGATGGAAGC CTTTGTCGCA
GCGCGTCAGG GCCGCCAGGA GACGACCGCA TGA
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| Protein sequence | MIESIITTCF QRRGIVWLVF VLIALYGTWS WTQLPVEAYP DIADVTSQVV TQVPGLGAEE
VEQQITVPLE RALMGTPGLH VLRSRSLFAL SLITLVFDDG TEGYFARQRV LERIQAVTLP
YGAIPGLDPY TSPTGEIYRY TLESKTRSLR ELSDLQFWTV IPRLQKVQGV ADVTNFGGLT
TQFSLALEPD RLTRYGVSLQ QVKSAITSNN ADGGGSVMDR GEQSYVIRGI GLLRSLQDIG
DVVVSNSNGV PVLVKDLGEV RYDNVERRGI LGKDNNPDTI EGIALLLKDS NPSVALQGIH
SAVEELNNSL LPKDVKVVPY LDRTALIDAT LHTVSATLTE GMLLVCVVLL IFLGSPRAAA
IVSLTIPLSL LIAFIFMHHL KIPANLLSLG AIDFGILVDG AVVLVENVLR LREENSERAL
TAGDAIDATL HVARPIFFGM AVIGCAYLPL LAFERIEYKL FSPMAYAVGA ALIGALLVAL
MLIPALAWLA FRKPRKMMHN RVLEALGQRY RALLERSVGR RGWLLACAAL ALCVLAVLGG
SIGRDFLPYI DEGSLWLQVQ MPPGITLDKA ARMANALRTA TLEFPEVSYV VTQTGRNDDG
TDYWTPSHIE ASIGLRPYKD WPSGMDKQGL IAALGARYAQ MPGYTVSMMQ PMIDGVQDKL
SGAHSDLTVK VFGDDLQQVR GVAEQVATAL HAVPGAADIA VDVEPPLPNL QVRFDRDAAA
RYGINAADVS DLIATGIGGS PIGQMYIGEK SYDLTVRFPQ RYRNDPRAIG ALRLRTAAGA
EIPLSAVASI TTTSGQSVIV REMGRRNIIV RLNVRGRDLS SFLSDAQATL VRHVRIDPQH
MQLVWGGQFE NLQRAQARLL VVLPTTLCIM FVLLFGAFGN LRQPTLVLAA VPLAMIGGLA
ALHLRGMTLN VSSAVGFIAL FGVAVLNAVL MLAQINRLRQ DPGMSLREAV VAGAVSRMRP
VLMTATVAAL GLTPAMLATG LGSDVQRPLA TVVVGGLVTA TALTLLLLPS LYYLMEAFVA
ARQGRQETTA
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