| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00697 |
|---|
| Symbol | |
|---|
| ID | 6305693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 2231115 |
|---|
| End bp | 2232341 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642639461 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_001913328 |
|---|
| Protein GI | 188576399 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGCC TGTTGGACCT GAAGCACGCT TACAAGCTCA GCGACGAGGA ACTGGTGGAG
CGCTGGGCCC AGAACGTGGT CTGGCAGCAC GTCAGCGGCA TGGCGTTCTA TGAGCCGCGC
CTGCCCTGCG ATGCCACGCA GGTCGGGCGT TTTCGCGCGG CCATCGGTGA GGCCGGGGTC
GAGGAACTGC TCAAGGCCAC CATCGACACC GCGGTGTCCT CCAAGGCCAT CGTGCCCGCC
GAGTTCGAAC GGCTGATCGT GGACACCACC GTGCAGGAGA AGGCCATTGC TCATCCGGTG
GATTGGCGCC TGATGGAGAA CGCGCGGCAC AAGCTGGTGG CGGCGGCCAA GCGCGCGGGC
ATCGCGCTCA AGCAGACCTT CGCCAAAGAA ACCAAGACGC TGCGGCGCAA AGCCGGCGGC
TACGCCCATG CCAGGCAGTT CAAGCGCCTG CGCAAGGTCC TCAAACGCCA GCGCACGCTC
CTGGGCATCG TACTGCGCGA GGTGCAGCGC AAGATCGGGC AAGCCAGCCA GGCCACGGCG
CCGGCGCTGG AGAATCTGCA CACGCTGATG CAGCGCGCCG AGCGCATCCA TGCTCAGCAA
CCCAATGGCA AGAACAAACT CGATGCCCTG CACGCGCCCG AAGTGGAGTG CATCGGCAAG
GGCAAGGCGC GCAAGCCCTA CGAGTTCGGG GTGAAGGTCA GCGTGGCCAT CACGCACAAA
CAGGGCCTGA TGGTCGGCGC GCGCAGCTTC ACCGGCACCC CCTATGACGG CCACACGTTG
CACGAGCAAC TGGAGCAGGC CCGGATCCTG AGCGAGGACA CAGCAGGCGC ACCTAAACAG
GTGGTGGTGG ACCTGGGCTT TCGCGGTGTG GATGCGGCCA ATCCCGGCGT TGAGATCATC
CACCGGGGCA CGTTCAAACG CCTGACAGAT GAGCAGCGCC GCTGGCTGAA GCGACGCCAG
GCGGTGGAGC CGGCCATCGG ACACTTGAAG CACGACAACG GCATGGATCG GTGCTGGTTG
CAAGGAGCGA ACGGCGATGC GCTGCACGCA GTGCTGTGCG CGGCGGGGGA CAACATCCGC
TGGTTGCTGC GGGCCATGGT GCGTCTGGGA CTGAAGGGTC TTTTTGCGCC TATGGTTGCG
AGACTCATCA TGCTGGCCAC AGTGCTCGCA ATGTCATTGC GAGCGAGGAA CACACGCCCA
CATCGGTTGG CTTGGTGTGT TTGGTGA
|
|---|
| Protein sequence | MASLLDLKHA YKLSDEELVE RWAQNVVWQH VSGMAFYEPR LPCDATQVGR FRAAIGEAGV
EELLKATIDT AVSSKAIVPA EFERLIVDTT VQEKAIAHPV DWRLMENARH KLVAAAKRAG
IALKQTFAKE TKTLRRKAGG YAHARQFKRL RKVLKRQRTL LGIVLREVQR KIGQASQATA
PALENLHTLM QRAERIHAQQ PNGKNKLDAL HAPEVECIGK GKARKPYEFG VKVSVAITHK
QGLMVGARSF TGTPYDGHTL HEQLEQARIL SEDTAGAPKQ VVVDLGFRGV DAANPGVEII
HRGTFKRLTD EQRRWLKRRQ AVEPAIGHLK HDNGMDRCWL QGANGDALHA VLCAAGDNIR
WLLRAMVRLG LKGLFAPMVA RLIMLATVLA MSLRARNTRP HRLAWCVW
|
|---|
| |