| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00635 |
|---|
| Symbol | |
|---|
| ID | 6305754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 2288335 |
|---|
| End bp | 2290563 |
|---|
| Gene Length | 2229 bp |
|---|
| Protein Length | 742 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642639521 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_001913386 |
|---|
| Protein GI | 188576457 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.617158 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAA CCAATTTCCT AATCGGTCGT GGTGAGCTGC TGACCCATGA CATCGTCGGA
CCGAAGCGCA TGCCAGGCGG CAAGGCCGAG GTTTACACCT TCGCACAGGC GCGGGAGCGA
ATGGCTCCTC AGTTCCACAG TGCTACAAAG GCACTGGACG AACTACCTGC TGATGCTTGC
CCAGGCGATT TTGCGGTAGC CCGGCTGATG ATGAATCCCA GTTTCATCGC TCGTTCCTAC
TTCCCCATGG GCTTATTGCG CAGCACGGGC CTGGAGTCCA TCGGGAGTCG TACCGTCAAG
GTCAAACCGC AGGCCTGGAC TCGCAAGGGG CAGCCGCATG AGACCACGAC GACCGAACTG
TTCGTCGCCG GCAAGCGCCA GGCTTTCCGC AACCTTTCAC GATGGACGGG AACCATCGAG
GCAGAATCCG ACGAGGGCGA AGATCTGACC CACATCGAAC AGTTCGCCGC CTTTGCGCCA
GCAGAGCGGA TCGCCAGTCT CGGCGGTCCG AAGGATCGTT TTTTTGAGGT CGGCCTGCAT
CTGTTGCCGG ACGAAGACCC CGAGCTGATT CAGAAGGCCT TCGTGAAGTT CGCCAAACGG
CAGGAGGTGA AGATTCACAG CGAAGTCGAT TTCGTCGCTG GCAACCTTTG GTTCGTACCG
GTCGAGGGCA AACCGCGCGA CATCGAGCGG CTGGCTAGCT TCTCCTTCGT GCGGGTTATC
CGTCCCGTGC CAAAGCTGCG CGGCATCCGT CCCATGCAAC GCAGCGGTGG TCCCTCAGTG
GGATGCAGCC TCCCCACCGA ACAGGCCCTT TCATCAGAAC CTCGTGTTGC CATCCTGGAC
GGCGGCCTGC CCAAGCACCA TCTCATCGGT CCCTGGCTGC GCTCGTACCG CAAGCTCGAT
GAAGACGCCG ACGATGATCC TGATGGTCCG GAGCACGGCT TGGGCGTGAC CTCGGCCGTG
TTGTTCGGAC CGATCCAGCC CAACGGAACG GCCGGCAGAC CATTCGCACC GGTGGACCAC
CTGCGTGTTC TGGACCAAGA GGCGGGCGGC AAAGATACAT TAGAGTTGTA TCGCACGCTC
GGACTCATTG AGCAGGTCTT GCTCTCGCGC TCCTACGAGT TCATCAACCT GAGCCTGGGC
CCCGATCTAG AAGTGGAGGA CCGTGAAGTC CACGCTTGGA CGTCGGTCAT CGACGAGCTG
CTCAGCGACG GCGACACGCT AATGACCGTG GCCGTTGGCA ATAACGGAGA AAGGGACCAC
GAGCTCGGCT ACAACCGCGT GCAGGTTCCA TCGGATTGCG TCAATGCGCT CGCGGTCGGC
GCGGCCGACG ATACCGATGC TGGCTGGGCA CGCGCGCCCT ACAGTGCGAT CGGGCCGGGC
CGCAGCCCTG GCGTCATCAA ACCAGACCTG ATGGCATTCG GTGGCAACCC AGCAGCCAAA
TACTTTCACG TGCTGGCACC AAACGCTAAG CCGGTACTGA CGCCACAGCT GGGTACTAGC
TTCGCGGCGC CGTACCTGCT GCGCAGCGCG GTCGGCATCC GAGCCATCTT GGGCGGTGAC
CTGACACCAC TCGCTATCAA GGCGCTTCTA GTCCACGCAG CCGATTCCGG CGAACATGAT
TTAGTCGAAG TAGGCTGGGG CAAGATTCCC GAGGACACGC TCGACATCAT CACCTGTCCG
GACGGGGTAG CCCGGGTTGT ATACCAGGGC GAGCTCAAGC CCAGTAAGTA CCTACGCGCC
ACTCTCCCGC TGCCAAAGGG AGGGCTGTTG GGCAATGTGC GCCTGAAGGC AACGTTCTGC
TACGCATCAC CCACCGATCC GCAGGATGCC GCGGCCTATA CCAAGGCGGG GCTCGAAGTC
GTCTTCAGGC CCAACGACGA GAAGGTCAAG GACGGGAAAA GCAACGCGGA CACAAAGGGA
TTCTTCGACT TGAAGAAGTT CGCCACCGAG CAAGAGCGGC GCTCGGATCA GGGCAAATGG
GAGACCGTGC TGCATGGGGC CAAGACCTTC CGTGGCTCTA GCCTCAAGAA CCCAGTGTTC
GACATTCACT ACAACGCACG CGACGGCGGT GGCCGGGCCA CAAATCGTGC CGAAAAGATC
CGCTATGCAT TGATCCTTTC GGTCGAGGCG CCGAGGCACG CCGATCTCTA CAATGAGATC
CTGCGTGCGT ATGCCAAGAC TCTCGTGCCG ATTCAGCCAC AGGTGTCCTT GCCGATTCGC
GTTCGATGA
|
|---|
| Protein sequence | MSQTNFLIGR GELLTHDIVG PKRMPGGKAE VYTFAQARER MAPQFHSATK ALDELPADAC
PGDFAVARLM MNPSFIARSY FPMGLLRSTG LESIGSRTVK VKPQAWTRKG QPHETTTTEL
FVAGKRQAFR NLSRWTGTIE AESDEGEDLT HIEQFAAFAP AERIASLGGP KDRFFEVGLH
LLPDEDPELI QKAFVKFAKR QEVKIHSEVD FVAGNLWFVP VEGKPRDIER LASFSFVRVI
RPVPKLRGIR PMQRSGGPSV GCSLPTEQAL SSEPRVAILD GGLPKHHLIG PWLRSYRKLD
EDADDDPDGP EHGLGVTSAV LFGPIQPNGT AGRPFAPVDH LRVLDQEAGG KDTLELYRTL
GLIEQVLLSR SYEFINLSLG PDLEVEDREV HAWTSVIDEL LSDGDTLMTV AVGNNGERDH
ELGYNRVQVP SDCVNALAVG AADDTDAGWA RAPYSAIGPG RSPGVIKPDL MAFGGNPAAK
YFHVLAPNAK PVLTPQLGTS FAAPYLLRSA VGIRAILGGD LTPLAIKALL VHAADSGEHD
LVEVGWGKIP EDTLDIITCP DGVARVVYQG ELKPSKYLRA TLPLPKGGLL GNVRLKATFC
YASPTDPQDA AAYTKAGLEV VFRPNDEKVK DGKSNADTKG FFDLKKFATE QERRSDQGKW
ETVLHGAKTF RGSSLKNPVF DIHYNARDGG GRATNRAEKI RYALILSVEA PRHADLYNEI
LRAYAKTLVP IQPQVSLPIR VR
|
|---|
| |