| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00623 |
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| Symbol | |
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| ID | 6305767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 2302697 |
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| End bp | 2305657 |
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| Gene Length | 2961 bp |
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| Protein Length | 986 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642639534 |
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| Product | transposase |
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| Protein accession | YP_001913399 |
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| Protein GI | 188576470 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCGA TCGAACGAAC TGCATACCCG CAATTCAAAC GAAATCCGGT CGTCCGCGAG
CTGGTTGCGG CCTACACCCC AACCGACGCT GAGGTGGCCT TCGTTGCCGA GCACACCCGG
CAGCCTGCGC ACCGCCTGAC GCTGACGATC CTGCTCAAGA CTTTCCAACG GCTGGGGTAC
TTCCCTTTGC TGGACGAAGT GCCGCCGGCG GTGGTGCGTC ACATCCGTGG CGCGTTGAAA
CTACGCGTGC AGGTCAAGCC AGTGAGTCTT GGCAACGCCT CGCGCTATCG CTACTACCGC
CGCATCCGGC AATTCCTGCA GGTCCGGGCA TACAACGACG GCGGGTTGAA GATTACGGCA
CGCGCGGTAT ACGAAGCCGC CGCGGTGATG GATAACCCGG CGGATCTGAT CAACGTGGCC
ATCGAACATC TCGTACGCGA TCGCGTTGAG CTGCCGGCGT TCTCCACGCT GGATCGCCTG
ACTCGGCGCA TTCGTACGCT GGTTAACGGG CGCTATTTCG CACAGATTCA GGCTCAACTG
ACCATCGACG AAAAACAGCG CCTTGAAGAC ATCCTGCAGG TCGAAGAGGG ACGCCAGAAG
AGCCCACTAC ATGCGATCAA GCGCCTGCCC AAGCGCTCTT CGTTGCAGCA TTTCCAGGAG
TTGATCGACC ATATCGGCGA ACTGGGCGAG TTGGTCGGCA GCGAGTTGCA TCTCGCGGGC
ATCCCTGAGA TCAAGCGCAA GCACTTCGCC GCAGAGGCGC GAGCATTGGA TGCTTCCGAG
CTGCGTAAGT TTCGGCCTGC CAAGCGCTAC GCCGTACTGG TGTGCTTGAT CCATCGGGCC
CGGGTCCAAA CGCGCGACGA CCTCGCGGAG ATGTTCATCA AGCGCATGGG GAACATCCAC
AACCGGGGGC GTGAGGAACT GGAGCGGCTG AGGGCGCGCT ATCGCGAGAA GACCGAAGCG
ATCGTGGCGA CTATGTCGGA TGTAGTCCGC GTCCTCGAGC ATCATCCAGG CGACACGGAG
GCCGGCCGCG AAATCCGCCG CCTGGTCAAC GCCCACGGCG GCGTGCAGAC TTTGCAGGCT
GACTGCAACG CCATTGCGGC GCATAGTGGC GACAACTACT TGCCGCTGCT TTGGCCATTC
TACAAAAGTC ATCGCGCTAC CATCCTACGG ATGGTGCGTA TGCTGGACTT GGCCTCGACC
ACAGAGGACC GCTCTCTGAT CGACGCGATC GAGCTGATCC TGACCCAGGA ACGGACCCGC
GGCGATTGGT TGGACGAACC GGTCGACCTG GCGTTCACCA CCCAACTCTG GCGCAAGACC
ATCGTCCATC GCACCGAACA GGGTGAAGAG CGCATCCACC GGCGCCTGTT CGAGGTCTGT
GTGTTCTCGT CGCTGGCCAA CGAACTGAAA TCGGGCGACG TGGCTGTGCG CGGTTCGGAA
ACCTACGCCG ACTACCGCGA ACAGTTGCTG CCGTGGGAGC AGTGCGAGTC TATGTTGGAG
GATTACTGCA AGCAGGTGGG GCTGCCGGCC ACGGCCGTGG GCTTCGTCAA CGCGTTGCAA
TCGCGCCTGA TGCAGGTCGC CGAGCTGACC GATCAAGGCT ATTTGGAGAA TGGCCAAGTC
GTCATCGGCG AGGATGGCAT CCCGGTGCTC AAGCGCAGCA AGGCCAAGGA GATGAGCAGC
GGGGCCCGCG CCCTGGAAAC CGCCATCCTA GACCGCATGC CCGAACGCAG CGTCATCGAG
ATCCTGTGCG ATGTGGCTCA TTGGACGCGC TGGACCCGGC ACTTCGGTCC TCTATCCGGT
TCGGACACCA AAATCGAACA ACCGACGGAG CGTTATGTCC TCACTGCCTT TACCTACGGA
TGCAACCTCG GACCGGCCCA GGCTGCCCGG CACCTGCGTG GTGCCGTCTC GGCGCACATG
CTGTCGTTCG TCAACCGCCG GCACGTGGAT GCCAACAAAC TGGCGGCGGC CTGTCGGGAC
ATCATCAACA GCTACGCCGG CCTGCAGCTC CCCAAATGCT GGGGCGATGG CAAGAGCGTG
GCCGCCGACG GCACCAAGTA CGACCTCTAC GACCAGAATC TTCTCGCCTC GTACCACATC
CGCTATGGTG GCTACGGCGG CATTGCCTAT CATCACGTGT CCGATACGTA CGTCGCGCTG
TTTAGTCACT TCATTCCGTG CGGTGTCTGG GAAGCGGTCT ACATCATTGA TGGCCTGCTG
AAGAACACCT CCGACATCCA GCCGGACACC GTCCACGCCG ACACGCAGGG ACAGTCGCTG
CCGGTCTTCG GCCTTTCGCA TCTTTTAGGC ATCCAACTGA TGCCGCGCAT CCGCAACTGG
CGCGAATACA AGTTCTTCCG CCCCGACGGG GACATTCGCT ACGAACACAT CGACGCGCTG
TTCCGGGACA CTGTCGACTG GGATCTGATC GAGACCCACT GGAAAGACCT GATGCAGGTC
GTGCTCTCGA TCAAGACAGG CAAGATCGCG GCCTCGACGC TGCTACGTAA GCTGGGCAAC
TACAGCCGCA AGAACCGGCT GTACCAGGCC TTCAAGGCGC TCGGCTCGGC CGTGCGCACG
TTGTTCCTGC TGCAGTACAT CTCCAACCGC GAGCTGCGCG AGCAGATCAC CGCTTCGACC
AACAAGGTGG AGGCCTACAA CGGCTTCGCG AAGTACTTCT TCTTCGGCGG GGAAGGGGTG
ATTGCCGACA ATGACCCCGT TGAGCAGGAG AAGGCCGTCA AATACAACGA CCTGGTCTCG
AATGCCGTCA TCTTCTACAA CGTGGTTGAA CAGACCCGGA TCATGAAGGC CCTGATGCGG
CAGGGGTGGA AGATCACCCG GGAGGACGTG GCTTTCCTCA GCCCGTATGT GACCAGTCAT
GTGAAGCGGT TCGGGGACTA CCTAATTGAC GTGGAGGCAA TCCCAGAACC GTACGAGATT
GAACTGGCGT TGGTAGCGTA G
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| Protein sequence | MASIERTAYP QFKRNPVVRE LVAAYTPTDA EVAFVAEHTR QPAHRLTLTI LLKTFQRLGY
FPLLDEVPPA VVRHIRGALK LRVQVKPVSL GNASRYRYYR RIRQFLQVRA YNDGGLKITA
RAVYEAAAVM DNPADLINVA IEHLVRDRVE LPAFSTLDRL TRRIRTLVNG RYFAQIQAQL
TIDEKQRLED ILQVEEGRQK SPLHAIKRLP KRSSLQHFQE LIDHIGELGE LVGSELHLAG
IPEIKRKHFA AEARALDASE LRKFRPAKRY AVLVCLIHRA RVQTRDDLAE MFIKRMGNIH
NRGREELERL RARYREKTEA IVATMSDVVR VLEHHPGDTE AGREIRRLVN AHGGVQTLQA
DCNAIAAHSG DNYLPLLWPF YKSHRATILR MVRMLDLAST TEDRSLIDAI ELILTQERTR
GDWLDEPVDL AFTTQLWRKT IVHRTEQGEE RIHRRLFEVC VFSSLANELK SGDVAVRGSE
TYADYREQLL PWEQCESMLE DYCKQVGLPA TAVGFVNALQ SRLMQVAELT DQGYLENGQV
VIGEDGIPVL KRSKAKEMSS GARALETAIL DRMPERSVIE ILCDVAHWTR WTRHFGPLSG
SDTKIEQPTE RYVLTAFTYG CNLGPAQAAR HLRGAVSAHM LSFVNRRHVD ANKLAAACRD
IINSYAGLQL PKCWGDGKSV AADGTKYDLY DQNLLASYHI RYGGYGGIAY HHVSDTYVAL
FSHFIPCGVW EAVYIIDGLL KNTSDIQPDT VHADTQGQSL PVFGLSHLLG IQLMPRIRNW
REYKFFRPDG DIRYEHIDAL FRDTVDWDLI ETHWKDLMQV VLSIKTGKIA ASTLLRKLGN
YSRKNRLYQA FKALGSAVRT LFLLQYISNR ELREQITAST NKVEAYNGFA KYFFFGGEGV
IADNDPVEQE KAVKYNDLVS NAVIFYNVVE QTRIMKALMR QGWKITREDV AFLSPYVTSH
VKRFGDYLID VEAIPEPYEI ELALVA
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