| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00596 |
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| Symbol | lolD |
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| ID | 6305798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 2329684 |
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| End bp | 2330394 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642639564 |
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| Product | lipoprotein releasing system, ATP-binding protein |
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| Protein accession | YP_001913428 |
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| Protein GI | 188576499 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.820221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAAACAC CAGAACAGGC AACTGCGGTC ATTCGCGCCG AGGCGCTGGC CAAGACCTAC
GCCGAAGGCA AGATGCGCAC GCCGGTATTC GATGGCCTGG ATCTATCGGT GGCGACCGGC
GAAACCGTGG CGATCGTCGG CGCTTCCGGT GCCGGCAAGA GCACCTTGCT GCATCTGCTC
GGCGGGTTGG ATATTCCGAC CGCGGGCGAA GTGTATGTAG CGGGTGAGCG CATGTCGGCG
CTGTCCGATG CACAGCGCGG CAAGCTACGC AATCAGTCGC TTGGCTTTGT GTATCAGTTC
CACCACCTGT TACCCGAATT CACCGCGCTG GAAAACGTGA TGATGCCGGT GCTGCTGTCT
GGCAAAAACG TGGCCGTCGC CAAAGGGCAG GCGCTGCAAT TGTTGGAATC GGTCGGGCTC
GGGCATCGTA TCGACCACAA GCCCAGTGAA CTGTCGGGCG GCGAGCGTCA ACGCTGTGCC
GTGGCGCGTG CACTGGTCAA CAAGCCCGGC TGCGTGTTGG GCGACGAGCC CACCGGCAAC
CTCGACGACA AGACCGCGGG CACGGTGTTC GAGCTGATGC TGGAGCTCAA TCGTGCCCAG
CGCACCAGCC TGGTCTTGGT GACGCACGAC CGTGGCTTGG CACGGCGCCT GGACCGCGTC
CTGGAGCTGC ATCAAGGAAA GCTGCGGGAA CTGGCGCCGT CTGCGGTGTA A
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| Protein sequence | MQTPEQATAV IRAEALAKTY AEGKMRTPVF DGLDLSVATG ETVAIVGASG AGKSTLLHLL
GGLDIPTAGE VYVAGERMSA LSDAQRGKLR NQSLGFVYQF HHLLPEFTAL ENVMMPVLLS
GKNVAVAKGQ ALQLLESVGL GHRIDHKPSE LSGGERQRCA VARALVNKPG CVLGDEPTGN
LDDKTAGTVF ELMLELNRAQ RTSLVLVTHD RGLARRLDRV LELHQGKLRE LAPSAV
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