Gene PXO_00590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_00590 
Symbol 
ID6305804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand+ 
Start bp2335444 
End bp2336106 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content65% 
IMG OID642639570 
Productbiopolymer transport protein 
Protein accessionYP_001913434 
Protein GI188576505 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.421222 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTGGAGC TGGTCAAGGC AGGCGGTTGG CCGATGGTGC CGTTGCTGTT GCTGGGCGTG 
GTTGCCCTGG CGATCGTGCT GGAGCGTCTG TGGAGCCTGC GCCGCAACGA GGTGACGCCT 
CCGGGTCTGG GCGAAGAGGT CCGTCATTGG GCCGCGCGCG GCAATCTGGA TCCCACCCAC 
ATCGAATCGC TGCGCCGCAA TTCGCCGTTG GGCGCCTTGC TGGCCGCCGC GCTGGACGTG 
CGTGGCCGCC CGCGTGAATT GATCCGCGAA CGTATCGAAG ACACCGGCCG GCATGTCGTG 
CACCGGATGG AGCACTATCT GAACGCGTTG GGCACGATTG CATCCGCCGG CCCATTGTTG 
GGCCTGCTAG GCACCGTGGT CGGCATGATC CAGATGTTTC TCGGCATCCT CGATCATGGC 
GTGGGCGATG TGAATCAACT TGCCGGCGGC ATCGGCAAGG CGCTGGTGTG CACCGCTACC 
GGCATGATCA TCGCCGTGCC TGCATTGATG GCGCATCGCT TCTTCAAGGG GCGCATTGCC 
GGTTACATCA TCGAGATGGA ACAGGAAGCC ACCTTGTTGT TGGACACCAT GGATGGCCGT 
GTGGTGCCGG CCGCCGTGGC GCCAGACGCA ACGGGCGCCA AGCCCGTCAC GGCAAAGGGC 
TGA
 
Protein sequence
MLELVKAGGW PMVPLLLLGV VALAIVLERL WSLRRNEVTP PGLGEEVRHW AARGNLDPTH 
IESLRRNSPL GALLAAALDV RGRPRELIRE RIEDTGRHVV HRMEHYLNAL GTIASAGPLL 
GLLGTVVGMI QMFLGILDHG VGDVNQLAGG IGKALVCTAT GMIIAVPALM AHRFFKGRIA 
GYIIEMEQEA TLLLDTMDGR VVPAAVAPDA TGAKPVTAKG