Gene PXO_00579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_00579 
Symbol 
ID6305818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp2345984 
End bp2346883 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content63% 
IMG OID642639584 
Producttransposase 
Protein accessionYP_001913445 
Protein GI188576516 
COG category[L] Replication, recombination and repair 
COG ID[COG2826] Transposase and inactivated derivatives, IS30 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCAAAGG GCAGTTACAC AGTTCAATTT ACAGACTCGC GTGCGCCCAG CACGATCAGC 
CGCGAACTGC GCCGCAACCA GCACGCTGCG CGGTACCGGC CCGATCACGC GCAGCGCATC
AGCGAGCATC GGCGCACACA GGCCAGCCGG CGTCCACGCA TCGACGCTGA GCGTATCGGC
CAGATCGAGG ACCTGCTGAG GGAGGACTTC AGTCCCGAAC AGATCGCCGG TCGCACCGGC
TTGGCCAGTC ACGCATCGAT CTATCGGCAC ATCGACGCCG ATCAGAAGCG CGGTGGTCAG
TTGTTCATGC ATCTACGCAA ACGCCGCCGC AAGCGCCGTC GGCGTGGCGT GCGCGATGGC
CGCGGGCAGC TGACGCATCG GCGCAGCTGG ACACAGCGCC CCAGTGTGGT TGAGCAGCGA
AGCCGTATCG GCGACTGGGA GCTGGAGACC ATCAGGGCCT CACACGGAAA GGGCGTGGTG
GTCAGCATGA CCGAACGCCG CAGTCGCCTG CATCTGCTGG CTTACTCGCC CGACGGCACC
GCCGAGAACG TGCGCAACGC CATTGTCCAG CGACTGGGCG GCCTGCGCCA TGCAGTTCAC
ACCCTCACCG CCGACAACGG CAAGGAGTTC GCTGATCATC GGCTCATTGC CGCCTGCCTG
CAGAGCGATT TCTATTTCGC AGATCCGTAC TGCCCATGGC AGCGCGGCAG CAACGAGAAT
GCCAACGGAT TGACACGCCA ATACTTGCCA CGACAGACCG ATTTCAGCAC CATCACCGAT
GCGCACCTGC GATGGATCGA GCAGCGGCTC TACAATCGTC CGCGCAAGAT ACTTGGATTC
AAAACGCCCC TCGAAGTCTT CTCCGAGGAG GTCCTCAACA GCGTTGCGAA TCGGAGTTGA
 
Protein sequence
MSKGSYTVQF TDSRAPSTIS RELRRNQHAA RYRPDHAQRI SEHRRTQASR RPRIDAERIG 
QIEDLLREDF SPEQIAGRTG LASHASIYRH IDADQKRGGQ LFMHLRKRRR KRRRRGVRDG
RGQLTHRRSW TQRPSVVEQR SRIGDWELET IRASHGKGVV VSMTERRSRL HLLAYSPDGT
AENVRNAIVQ RLGGLRHAVH TLTADNGKEF ADHRLIAACL QSDFYFADPY CPWQRGSNEN
ANGLTRQYLP RQTDFSTITD AHLRWIEQRL YNRPRKILGF KTPLEVFSEE VLNSVANRS