| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00521 |
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| Symbol | secF |
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| ID | 6305584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 2118167 |
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| End bp | 2119135 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642639352 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001913219 |
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| Protein GI | 188576290 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTT TTCCGCTTCA CCTGATTCCA AACGACACCA AGATCGATTT CATGCGCTGG
CGCAAGCCGG TGCTGATTTT GATGCTGGTG CTGGCAGTCG CCTCGGTCGG CATCATCGTC
GGCAAGGGCT TCAACTACGC GCTGGAGTTT ACCGGCGGCA CGCTGGTGCA GACCTCGTTC
CAGAAGACCG TGGACGTGGA CCAGGTACGC GAAAAGCTGT CCAAGGCAGG CTTCGAAAAC
GCCCAGGTGC AGAATGCCCG CGGCGGCAAT GACGTCATGA TCCGCCTGCA GCCACATGGC
CAGAGCAATA ATCGCGACGA TGCCGCACGC ACTGTTGCTG AAGAGGTGCG CAAGGCGGTG
ACCAGCGATG AGAATCCGGC CACCGTGCAG CCTGGCGAAT TCGTCGGCCC GCAGGTCGGT
AAGGATCTGG CATTGAATGG CGTGTATGCC ACGGTGTTCA TGCTGGTGGG CTTTTTGATC
TATATCGCGT TCCGCTTCGA GTGGAAGTTT GCGGTGGTCG CCAGCCTGAC CGCGTTGTTC
GATTTGCTGG TCACCGTGGC CTTCGTGTCG CTGACCGGCC GCGAGTTCGA CCTGACTGTG
CTGGCCGGCC TGCTGTCGGT GATGGGCTTT GCGATCAACG ACATCATCGT GGTGTTCGAC
CGTGTGCGCG AAAACTTCCG CGCACTGCGC GTGGAGCCGC TGGAAGTGCT CAATCGTTCG
ATCAACCAGA CGCTCTCGCG CACGGTGATC ACCGCGGTGA TGTTCTTCCT GTCGGCGTTG
GCGCTGTACA TCTACGGCGG CGAGTCGATG GAAGGTCTGG CCGAGACGCA CATGATTGGC
GCGGTGATCG TGGTGATCTC GTCGGTGATC GTGGCCGTGC CGATGCTGAG CATCGGGCCG
TTTGCGGTGA CCAAGCAGGA TCTGCTGCCC AAGGCCAAGG ACGTGGAGGC GCTGGCGCGC
CGTCCTTGA
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| Protein sequence | MKIFPLHLIP NDTKIDFMRW RKPVLILMLV LAVASVGIIV GKGFNYALEF TGGTLVQTSF
QKTVDVDQVR EKLSKAGFEN AQVQNARGGN DVMIRLQPHG QSNNRDDAAR TVAEEVRKAV
TSDENPATVQ PGEFVGPQVG KDLALNGVYA TVFMLVGFLI YIAFRFEWKF AVVASLTALF
DLLVTVAFVS LTGREFDLTV LAGLLSVMGF AINDIIVVFD RVRENFRALR VEPLEVLNRS
INQTLSRTVI TAVMFFLSAL ALYIYGGESM EGLAETHMIG AVIVVISSVI VAVPMLSIGP
FAVTKQDLLP KAKDVEALAR RP
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