| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00514 |
|---|
| Symbol | |
|---|
| ID | 6305591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 2125130 |
|---|
| End bp | 2126131 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642639359 |
|---|
| Product | putative ISXoo14 transposase |
|---|
| Protein accession | YP_001913226 |
|---|
| Protein GI | 188576297 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3666] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0342548 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAACG ATGCCCTGCG GCGTTTGGAC GGTCTGTTCG AGCGGATGTA CGCGCCCAAC
GACAAGGGAG GCCGTCCGAG CATCGCGCCG GAGAAGCTGG CGCGGGCGAT GCTGCTGCAG
GTGTTCTACA GCATTCGTTC CGAGCGCCAG TTGATGGAGC AGGTGCAGTA CAACCTGTTG
TTTCGTTGGT TCATCGGCCT GTCGATGGAC GATGCGGTGT GGGTGCCGAC GGTGTTCAGC
AAGAACCGCG AACGCCTGAT CGAACACGAC GTGGTGGTGG CGCTGTTCAA CGAGATCGTG
GAGATGGCCG ATGCCAAGGG CTGGCTGTCG GGCGAGCACT TCAGCGTGGA TGGCACGCTG
ATCCAGGCCT GGGCCGGGCA CAAGAGTTTC GTGCGCAAGG ATGGCGATGA CAATGGCGAC
GGCACGGACT TCCGCGGCAC GTCTCGGAGC AATGAAACAC ACGCCTCCAC GACCGATCCG
CACGCGCGTC TGTACCGCAA GGGCAAGACC GCCAGTGAGT TGCGTTACAT GGGCCATACG
CTGGCCGACA ATCGCCACGG GCTGATCGCA AATGCACGGG TGACCCATGC CGATGGTCAC
GCCGAGCGTG AAGCGGCCAA GGCCATGATC GGTGACGCCC GCCAGGCGAA CCCGGACGGT
GCACTGACGC TGGGCGCGGA CAAGGGGGAC GACGCGGCCG AATTCGTCGA GGCATTGAAG
GAAATCGGAG TTGCCCCGCA TATCGCGCAG AACACCAGCA ATCGTCGCTC GGCGGTTCCG
GATGAGGTGG CTGCACGCGT TGGCTATGCG ATCTCGCAGA CCAAGCGGAA ACTGATTGAA
CAAGGCTTTG GCTGGGCCAA GCTGATCGGC ACCATTGGCC AAGTGATGGT GCGGGGCCTG
GAGAAGGTGG ATCAGGTGTT CATGTTGAAC ATGACCGCCT ACAACCTGGT ACGCATGCGT
ACCCTGGGAC AGATGTGCCT GCAGGCCGGG GAAACGGCAT GA
|
|---|
| Protein sequence | MVNDALRRLD GLFERMYAPN DKGGRPSIAP EKLARAMLLQ VFYSIRSERQ LMEQVQYNLL
FRWFIGLSMD DAVWVPTVFS KNRERLIEHD VVVALFNEIV EMADAKGWLS GEHFSVDGTL
IQAWAGHKSF VRKDGDDNGD GTDFRGTSRS NETHASTTDP HARLYRKGKT ASELRYMGHT
LADNRHGLIA NARVTHADGH AEREAAKAMI GDARQANPDG ALTLGADKGD DAAEFVEALK
EIGVAPHIAQ NTSNRRSAVP DEVAARVGYA ISQTKRKLIE QGFGWAKLIG TIGQVMVRGL
EKVDQVFMLN MTAYNLVRMR TLGQMCLQAG ETA
|
|---|
| |