| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00505 |
|---|
| Symbol | talC3b |
|---|
| ID | 6305344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 1864934 |
|---|
| End bp | 1866895 |
|---|
| Gene Length | 1962 bp |
|---|
| Protein Length | 653 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642639114 |
|---|
| Product | TAL effector AvrBs3/PthA |
|---|
| Protein accession | YP_001912987 |
|---|
| Protein GI | 188576058 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.467766 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCAG TGGAGGCAGT GCATGCATGG CGCAATGCAC TGACGGGTGC CCCCCTGAAC
CTGACCCCGG ACCAAGTGGT GGCCATCGCC AGCAATAGTG GCGGCAAGCA GGCGCTGGAG
ACGGTGCAGC GGCTGTTGCC GGTGCTGTGC CAGGACCATG GCCTGACCCC GGACCAGGTC
GTGGCCATCG CCAGCCACGA TGGCGGCAAG CAGGCGCTGG AGACGGTGCA GCGGCTGTTG
CCGGTGCTGT GCCAGGACCA TGGCCTGACC CCGGACCAGG TGGTGGCCAT CGCCAGCAAT
GGCGGCGGCA AGCAGGCGCT GGAGACGGTG CAGCGGCTGT TGCCGGTGCT GTGCCAGGAC
CATGGCCTGA CCCCGGACCA GGTGGTGGCC ATCGCCAGCA ATGGCGGCGG CAAGCAGGCG
CTGGAGACGG TACTGTGCCA GGCCCATGGC CTGACCCCGG CGCAGGTGGT GGCCATCGCC
AGCAATGGCG GCGGCAAGCA GGCGCTGGAG ACGGTGCAGC GGCTGTTGCC GGTGCTGTGC
CAGGCCCATG GCCTGACCCT GGACCAGGTC GTGGCCATTG CCAGCAATGG CGGCGGCAAG
CAGGCGCTGG AGACGGTGCA GCGGCTGTTG CCGGTGCTGT GCCAGGCCCA TGGCCTGACC
CCGGCGCAGG TGGTGGCCAT CGCCAGCAAT GGCGGCGGCA AGCAGGCGCT GGAGACGGTG
CAGCGGCTGT TGCCGGTGCT GTGCCAGGCC CATGGCCTGA CCCCGGCCCA GGTGGTGGCC
ATCGCCAGCC ACGATGGCGG CAAGCAGGCG CTGGAGACGG TGCAGCGGCT GTTGCCGGTG
CTGTGCCAGG CCCATGGTCT GACCCTGGAC CAGGTAGTGG CCATTGCCAG CCACGATGGC
GGCAAGCAGG CGCTGGAGAC GGTGCAGCGG CTGTTGCCGG TGCTGTGCCA GGCCCATGGT
CTGACCCTGG ACCAGGTCGT GGCCATCGCC AGCCACGATG GCGGCAAGCA GGCGCTGGAG
ACGGTGCAGC GGCTGTTGCC GGTGCTGTGC CAGGACCATG GTCTGACCCC GGCGCAGGTG
GTGGCCATCG CCAGCAATAA CGGCGGCAAG CAGGCGCTGG AGACGGTGCA GCGGCTGTTG
CCGGTGCTGT GCCAGGACCA TGGCCTGACC CCGGACCAGG TGGTGGCCAT CGCCAGCCAC
GATGGCGGCA AGCAGGCGCT GGAGACGATG CAGCGGCTGT TGCCGGTGCT GTGCCAGGCC
CATGGCCTGA CCCCGGACCA GGTCGTGGCC ATCGCCAGCA ATGGCGGCGG CAAGCAGGCG
CTGGAGACGG TGCAGCGGCT GTTGCCGGTG CTGTGCCAGG CCCATGGCCT GACCCCGGAC
CAGGTCGTGG CCATCGCCAG CCACGATGGC GGCAAGCAGG CGCTGGAGAC GGTGCAGCGG
CTGTTGCCGG TGCTGTGCCA GGACCATGGC CTGACCCCGG ACCAGGTCGT GGCCATCGCC
AGCCACGATG GCGGCAAGCA GGCGCTGGAG ACGGTGCAAC GGCTGTTGCA GGTGCTGTGC
CAGGACCATG GCCTGACCCC GGACCAGGTC GTGGCCATCG CCAGCCACGA TGGCGGCAAG
CAGGCGCTGG AGACGGTGCA ACGGCTGTTG CCGGTGCTGT GCCAGGACCA TGGCCTGACC
CCGGACCAGG TCGTGGCCAT CGCCAGCCAC GATGGCGGCA AGCAGGCGCT GGAGACGGTG
CAGCGGCTGT TGCCGGTGCT GTGCCAGGAC CATGGCCTGA CCCCGGACCA GGTCGTGGCC
ATCGCCAGCA ATGGCGGCAA GCAGGCGCTG GAGAGCATTG TTGCCCAGTT ATCTCGCCGT
GATCCGGCGT TGGCCGCGTT GACCAACGAC CAACTCGTCG CCTTGGCCTG CCTCGGCGGA
CGTCCTGCCC CGCATTCAAG GAAGAGGAAA TCGCATGATT GA
|
|---|
| Protein sequence | MTAVEAVHAW RNALTGAPLN LTPDQVVAIA SNSGGKQALE TVQRLLPVLC QDHGLTPDQV
VAIASHDGGK QALETVQRLL PVLCQDHGLT PDQVVAIASN GGGKQALETV QRLLPVLCQD
HGLTPDQVVA IASNGGGKQA LETVLCQAHG LTPAQVVAIA SNGGGKQALE TVQRLLPVLC
QAHGLTLDQV VAIASNGGGK QALETVQRLL PVLCQAHGLT PAQVVAIASN GGGKQALETV
QRLLPVLCQA HGLTPAQVVA IASHDGGKQA LETVQRLLPV LCQAHGLTLD QVVAIASHDG
GKQALETVQR LLPVLCQAHG LTLDQVVAIA SHDGGKQALE TVQRLLPVLC QDHGLTPAQV
VAIASNNGGK QALETVQRLL PVLCQDHGLT PDQVVAIASH DGGKQALETM QRLLPVLCQA
HGLTPDQVVA IASNGGGKQA LETVQRLLPV LCQAHGLTPD QVVAIASHDG GKQALETVQR
LLPVLCQDHG LTPDQVVAIA SHDGGKQALE TVQRLLQVLC QDHGLTPDQV VAIASHDGGK
QALETVQRLL PVLCQDHGLT PDQVVAIASH DGGKQALETV QRLLPVLCQD HGLTPDQVVA
IASNGGKQAL ESIVAQLSRR DPALAALTND QLVALACLGG RPAPHSRKRK SHD
|
|---|
| |