| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00490 |
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| Symbol | |
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| ID | 6305359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 1886669 |
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| End bp | 1887946 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642639128 |
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| Product | regulator of pathogenicity factors |
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| Protein accession | YP_001913001 |
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| Protein GI | 188576072 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCC TCGCCCCCCG CCGTGCCCGC ACCCGCCTGC TGTGCCTGTC GCTGACCTTG
GCACTGACCC CGCTCGCCCA CGCGCAAGAC GCCACCGACG CCTTCAAGCT CAAACTGGGC
TACACCGGCG AAGCCGCCTC GATGATCGAC GGCGGCCGCA AGAGCGGCGA CGCCTACGCC
GGCCAGTTGA TGGTCGGCAC CGATGTCGAC ATGGATCGCC TGTTCGGCTG GAACGGCGCC
ACGGTGAAGT TGTACGTCAC CAACCGCCAC GGCACCAACC TGGCCAACAG CAGCATCGGC
AACAGCACCT CGGTGCAGGA AATCTACGGC GGCCAGGGCA CCCGCCTGAC CAACTTCACC
CTGCTGCAGA AGCTCTTCAA CGACCGCCTG GAGCTGGAAG CCGGCCGCAG CGTGGCCAAC
ATCCATTTCC TTGGCTCGGA CCTGTGCCAG TACTTCCAGG GCAACTCGGC CTGCGGCAAC
CCCACCTTCG TCTTCCGCAC CAGTAACTTC ACCTACTGGC CGGTCTCCAG TTGGGCCGCA
GACGCCACCG CGTGGGTCAC GCCCAAGGTC TACGTCCACG TCGGCGCCTA CGAAGTGAAC
CCGGTGCAGG CCCAAGACGG CCAGCATGGC TTGAACTGGA GCACCAACGA CACCACCGGC
GTGGTGGTGC CCTATGCCGT CGGCTACAAG AACAAGGGCG GCGACGGCAG CATGGCAGCC
ATGTACGAAC TCGGCGGCTG GCAGGACAAC TCCGACTACA CCGACCCGCT GCGCGACCGC
AACGGCAACC CGGCCGTGCT GAGCGGCCTG CCGTATGGGA ACAAGCAGGG CCGCTCTGGC
CTGTTCGCGC GCTTCGAGCA GCAGGTGACC AACCCCGACC CGTCGAGCAC GCGCGGGCTC
ACCGTCTTCG GCGCCATTCT GCAGAGCACC AGCGGCCAGG CCATCGAAGA CCATTTCGTG
CAACTGGGCC TGGTGCAGAA AGGCACCTTC GCCAGCCGCC CGCAGGACAA CATCGCCTTC
GTGATCACCC AGCAGAAATA CAGCGACCAA GCGATCGAAA ACCTGCGCCT GGCGCGCGCC
TCTGCGGGCG GCACCGGCAC CCCCGCCGAC AACCAGATCA TGATGGAGCT GAGCTACGGC
ATCCAGGTCA CCAAGCAACT GCGCATCGCG CCGAACCTGC ACTACGTGAT CAACCCCGAC
CAGTTCAACG AACCGACCCG CACCAACGAT CTGAAGAACG CGTTGATCGC CGGCCTGCGG
ATCGACTGGA ATCTGTGA
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| Protein sequence | MTALAPRRAR TRLLCLSLTL ALTPLAHAQD ATDAFKLKLG YTGEAASMID GGRKSGDAYA
GQLMVGTDVD MDRLFGWNGA TVKLYVTNRH GTNLANSSIG NSTSVQEIYG GQGTRLTNFT
LLQKLFNDRL ELEAGRSVAN IHFLGSDLCQ YFQGNSACGN PTFVFRTSNF TYWPVSSWAA
DATAWVTPKV YVHVGAYEVN PVQAQDGQHG LNWSTNDTTG VVVPYAVGYK NKGGDGSMAA
MYELGGWQDN SDYTDPLRDR NGNPAVLSGL PYGNKQGRSG LFARFEQQVT NPDPSSTRGL
TVFGAILQST SGQAIEDHFV QLGLVQKGTF ASRPQDNIAF VITQQKYSDQ AIENLRLARA
SAGGTGTPAD NQIMMELSYG IQVTKQLRIA PNLHYVINPD QFNEPTRTND LKNALIAGLR
IDWNL
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