Gene PXO_00485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_00485 
Symbol 
ID6305364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp1895285 
End bp1895632 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content58% 
IMG OID642639133 
ProductISXoo11 transposase 
Protein accessionYP_001913006 
Protein GI188576077 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.722368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACGCCTG GCAACGCACA TGACGCACCC GCAGGCCGCG CGTTGCTTGA ACACCTGGGG 
CCAGTGGAGC GGCCGGTTCA TCTGCTGATG GATCGCGCTT ACGAAGGCAA TGAAACCCGC
CAGTTGGCGC TCGATCTTGG CTTCGTGCCG GTGGTTCCAC CCAAGTCCAA TCGGGTCGAT
CCTTGGGAGT ACGACAAGGA AATGTACAAG CGGCGCAACG AAGTGGAGAG GCTGTTCCGT
CGCTTGAAGG GCTACCGACG GATTTTCACG CGCTTCGAGA AGCTGGATGT CATGTTCCTT
GGCTTCCTCA GCTTCGTTCT GATCGTTGAT GGGCTTCGGA TGTGTTAA
 
Protein sequence
MTPGNAHDAP AGRALLEHLG PVERPVHLLM DRAYEGNETR QLALDLGFVP VVPPKSNRVD 
PWEYDKEMYK RRNEVERLFR RLKGYRRIFT RFEKLDVMFL GFLSFVLIVD GLRMC