Gene PXO_00474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_00474 
Symbol 
ID6305377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp1915390 
End bp1916619 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content61% 
IMG OID642639146 
Producthypothetical protein 
Protein accessionYP_001913019 
Protein GI188576090 
COG category[S] Function unknown 
COG ID[COG2733] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.20187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTTGC TGCTGGCAAT GTTCGCTGGC TTCATCACCA GCCACCTGAT GGGCGAACAC 
GGCGTCTGGG CATGGGTGTC GGCCTTCTGC GAAGCGGCCA CGGTGGGCGC ATTGGCAGAC
TGGTTTGCGG TGGTCGCACT GTTCCGACGC CCGATGGGCC TGCCGATTCC GCATACCGCC
ATCCTGCCAC GCGGCAAGGA CCGGCTGGCC GACGGCCTGG CCGTGTTCGT GCGCGACCAG
TTCCTCGCCC CCGATGCGTT GATGGAAAAA TTGCGTGTGT TCGATCCCGC CAGCCGCCTG
GGCGATTGGT TGGCAAAACC CGAACAGGCA CGCATGCTGG CGCAGATGGC ACGCAGCTGG
ATGCTGCAGG CGCTGGAACT CCTCGACGAA GCGGCAGTCC GCCGCGCGAT TCACGGCTTC
GTGGTCGACC GCCTGCGCAA ATGGAATGCT GCCGCCACCA TCGGCGACAT CATGGCGCTG
CTCACCACCG ACGGGCGCCA TCAAAAACTG CTGGATGAAG TATTACTGCG GCTGGGCGAA
TGGCTGGATC AGGAACAGGT CAAGACGCGC GCCTCTGCAT TGATCGTGCG TTACGCGCAG
CGCGAGTGGC CCAAGCTGGT CGGCACCGTG AACTGGGTCA AGCCGATCGA AGAGATCGGC
GACAGTCTGG CCGACCGCAT GGCACGCGCG GCGATCGAAG AACTGCAGGA CCTCCTCAAG
ACGCCCGAGC ACCCAATCAG GCTCGACTAT GAGGCGTGGT TGCAGGGCTA CATCACGCGG
CTGCGCGATG AGCCGGAAAT GGCCGTACGC GTGGAAGAAC TCAAGCAACG CGCGATCGAA
CATCCGGCAT TGCAGGAATA CGTGCAAGGT CTCTGGAGCG AAATTCGCGA TGCATTGCGC
AACGACCTGG CGCGCGAGCA GTCGTCGATG GCCGCGCAGA TGGAACGTTC CATGCAATCG
CTCGGCCAGG CCTTGTCGCA AGACCCCTCG CTACGCGAAG CACTCAATCA ACATATGTTG
CAAGCGGCTG ATAAGCTCAC CACGCGCTTG CGCACATCGG TGACCGATCA CATTGCATCG
ACGATGAAAA GTTGGGACGA ACGTCACCTC GTCGAACAAT TGGAATTGGG TGTGGGGCGC
GATCTGCAAT ACATTCGCTT CAATGGAACG TTGGTCGGTG GGTTGATCGG GCTCATCCTT
CACGCGTTGT CGATCTGGCT CTCGTTCTGA
 
Protein sequence
MALLLAMFAG FITSHLMGEH GVWAWVSAFC EAATVGALAD WFAVVALFRR PMGLPIPHTA 
ILPRGKDRLA DGLAVFVRDQ FLAPDALMEK LRVFDPASRL GDWLAKPEQA RMLAQMARSW
MLQALELLDE AAVRRAIHGF VVDRLRKWNA AATIGDIMAL LTTDGRHQKL LDEVLLRLGE
WLDQEQVKTR ASALIVRYAQ REWPKLVGTV NWVKPIEEIG DSLADRMARA AIEELQDLLK
TPEHPIRLDY EAWLQGYITR LRDEPEMAVR VEELKQRAIE HPALQEYVQG LWSEIRDALR
NDLAREQSSM AAQMERSMQS LGQALSQDPS LREALNQHML QAADKLTTRL RTSVTDHIAS
TMKSWDERHL VEQLELGVGR DLQYIRFNGT LVGGLIGLIL HALSIWLSF