| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00465 |
|---|
| Symbol | |
|---|
| ID | 6305388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 1931400 |
|---|
| End bp | 1932716 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642639157 |
|---|
| Product | oxidoreductase |
|---|
| Protein accession | YP_001913030 |
|---|
| Protein GI | 188576101 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.835263 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCGCC CGCACGCGCC CCCGCCGCAC AGCGATCCAC CGGACAGCGG CTACCTGGAC
AGCTGGTACG CGCGCAGCAC GCCGGCCCTG CCCCGGCAGC CGCGGCTGCA AGGCGCCGAA
CATGCCGATG TCTGCATCCT CGGCGGCGGC TATACCGGCC TGACCGCCGC GCTGGCGCTG
GCCGAGGCCG GTTACACCGT CATCGTGCTG GAAGCCCGGC GCGTAGGCTG GGGTGCGTCC
GGGCGCAACG GTGGCCAAGC CATCGTCGGC TACGGTTGCG AGCAGGAGAC GCTGGAGGCG
CTGGTCGGCA ACGACGCTGC ACGCCTGCTG TTCGATTTCT CGCGCGATGG CATGCGCCTG
CTGCGCGCGC GCATCGCCCG CCATGCCATC GCCTGCGACT GGCGCGATGG GCACGCGCAT
GTTCCGCTAA AGCCGCGCCA GGTACGGGCG CTGCAGCACG GCATCGTGCG CATGGCCGAA
CGCTACGACT ACCCGCTGCA ATGGTGGGAC CGTGCGCGCA CCCGCCAGGT GCTGGACAGC
CCGCTGTATC TGGGTGCCAT GTTCGACCCT GCCAGTGGCC ATCTGCATCC GCTGGCCTAT
GCACTGGGCC TGGCCCGTGC CGCGCTGGCG GCCGGGGTGC GCATCTACGA AGACTCGGCC
GTGACGCAGC AGCAGGCCGG CACGCGTGTG GTCATGCACA CCGCACACGG CAGCGTCACC
GCAAGCTTCG GGGTGATCGC CGGCAATGCC CTGCTGCACG GCATCGCCCC GACGCTGGAG
CAGCGCATCA TGCCGGTGGG CACCTATGTC GGCGCCACCC CGCCCCTGGG CGAAGCGCGC
GCACGCGCCC TGATTGCCAA CGACATGGCG GTGGCCGACA CCAACTGGGC ACTGGATTAC
TACCGGCTCA GCCCCGACCA CCGCCTGCTG TTCGGCGGGC GTGCCAGTTA CTCTTCGCGT
CCGCCCGCGG GCCTGCAGCG CCTGATGACC CAGCGCATGC ACACGGTGTT TCCGCAGCTG
CACGATGTGT CGCTGGAAAC CCTGTGGGGT GGCTACGTGG ACATCTCGCG CAACCGTGCG
CCGCACTGGG GCCGGCTGGC GCCCAACCTG TACTTCGCGC AGGGCTTCTC CGGGCACGGC
GTCGCCGCCA CGGGCCTGGC TGGCCAGGTC ATCGCCGATG CCATCGCCGG CCAGAGCCGG
CGCCTGGACG TGTTCGAACG CATCGGGCAT CGCCCGTTTC CCGGCGGGCA GCGACTGCGC
ACCCCACTGC TGGTGGCGGC GATGAGCTGG CATCGGCTGC GCGATGCACT GTGGTGA
|
|---|
| Protein sequence | MTRPHAPPPH SDPPDSGYLD SWYARSTPAL PRQPRLQGAE HADVCILGGG YTGLTAALAL
AEAGYTVIVL EARRVGWGAS GRNGGQAIVG YGCEQETLEA LVGNDAARLL FDFSRDGMRL
LRARIARHAI ACDWRDGHAH VPLKPRQVRA LQHGIVRMAE RYDYPLQWWD RARTRQVLDS
PLYLGAMFDP ASGHLHPLAY ALGLARAALA AGVRIYEDSA VTQQQAGTRV VMHTAHGSVT
ASFGVIAGNA LLHGIAPTLE QRIMPVGTYV GATPPLGEAR ARALIANDMA VADTNWALDY
YRLSPDHRLL FGGRASYSSR PPAGLQRLMT QRMHTVFPQL HDVSLETLWG GYVDISRNRA
PHWGRLAPNL YFAQGFSGHG VAATGLAGQV IADAIAGQSR RLDVFERIGH RPFPGGQRLR
TPLLVAAMSW HRLRDALW
|
|---|
| |