Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00451 |
Symbol | |
ID | 6305404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 1949969 |
End bp | 1950847 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642639173 |
Product | polar amino acid transporter |
Protein accession | YP_001913046 |
Protein GI | 188576117 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4535] Putative Mg2+ and Co2+ transporter CorC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0391689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGAAG ACGACAGTAG CCAATCCCTA GAAGCACCGG AAAAACGCCG TAGCTGGCTC GAGCGCCTCA GCGCTGCCTT CTCTGGCGAA CCCCATACCC GCGACGAACT TGTCGCCTTG CTGCGGACCG CCGAACAGGA CGGGCTCATC GCCGCAGACA CCTTGCGCAT GATGGAAGGC GCGATTTCCG TGTCCGAGCT CACCGTGGGC GATGTGATGA TCTCGCGCTC GCAGATGGTC TCGCTGCCAG TGGAAGCGCG TTTCATCGAC CTGATGAAGC AGGTGATCGA ATCCGGCCAT TCGCGCTTTC CGGTGCACGG CGAGAACAAG GACGAAGTGC TCGGCATCTT GCTGGCCAAG GACTTGCTGC GCGGCGTCGT TGCCGATAAC GGACCTGGCA ACGTGCGCGA ATTGCTGCGC CCGGCGGTGC TGATCCCAGA GTCCAAGAAG CTCAATGTCC TGCTCAAGGA ATTCCGCCTG TCGCGCAACC ACATGGCGAT CGTGGTGGAC GAGTACGGCG GTGTTGCCGG GCTGGTCACC ATCGAGGACG TGCTGGAACA GATCGTCGGC GAGATCGACG ACGAGCACGA CGATGCCGAG GACGAGAATT CGCTCATTGC GATCCAGGCC GACGGACGCT ATGTGGTCGA TGCGTTGACG CCGATCGAAG ACTTCAACGA ACGCTTCGGC GCCGAGTTCC CCGACGACGA GTACGACACT GTCGGCGGGC TGGTCACCGA TGCGATCGGG CACCTGCCCG AAACCGGCGA AGAGCTGACG CTCGGGCGGT TTGCGTTCCG CGTGGCCAAG GCCGATGCGC GGCGCGTGCA TGCCTTCCAC GTCACCATTC TGCCGCCCGA CCCGCAGGAC GACGCTTGA
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Protein sequence | MSEDDSSQSL EAPEKRRSWL ERLSAAFSGE PHTRDELVAL LRTAEQDGLI AADTLRMMEG AISVSELTVG DVMISRSQMV SLPVEARFID LMKQVIESGH SRFPVHGENK DEVLGILLAK DLLRGVVADN GPGNVRELLR PAVLIPESKK LNVLLKEFRL SRNHMAIVVD EYGGVAGLVT IEDVLEQIVG EIDDEHDDAE DENSLIAIQA DGRYVVDALT PIEDFNERFG AEFPDDEYDT VGGLVTDAIG HLPETGEELT LGRFAFRVAK ADARRVHAFH VTILPPDPQD DA
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