| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00446 |
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| Symbol | miaB |
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| ID | 6305409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 1954484 |
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| End bp | 1955866 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642639178 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_001913051 |
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| Protein GI | 188576122 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00312623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGCGCC CTTCCGCGCC TGCCGTGGTG CGCGGCAAGC TCTATATCAA GACCCACGGG
TGCCAGATGA ACGAGTATGA CTCGGCAAAG ATGGCCGACG TGCTCGCCGC CTCCGAAGGC
CTGGAGCTGA CCGATAACCC GGAAGAAGCG GATGTGGTGC TGGTCAACAC CTGCTCCATT
CGCGAAAAGG CGCAGGAAAA GGTCTTCAGT CAGTTGGGGC GCTGGAAGGC GCTGAAGGCC
GGCGGCAAGC CGGTGATCAT CGGCGTCGGC GGCTGTGTGG CGTCGCAGGA AGGCGAAGCC
ATCGTCAAAC GTGCGCCCTA TGTAGACCTG GTGTTCGGCC CGCAGACGCT GCACCGCTTG
CCGGAATTGA TCCGCGCACG GCGCGAATCG GGCAAGTCGC AGGTGGACAT CAGCTTCCCG
GAGATCGAGA AGTTCGACCG CCTGCCCGAG CCGCGTGCCG AAGGCCCGTC GGCGTTCGTC
TCGATCATGG AAGGCTGCTC CAAATACTGC TCGTTCTGCG TGGTGCCTTA CACCCGTGGC
GAAGAAGTCA GCCGGCCGTT CGAAGACGTG CTGGTGGAAG TGGCGCAATT GGCGGCGCAA
GGCGTGCGCG AGATCAACCT GCTCGGCCAG AACGTCAACG CGTACCGCGG TGCATATGGC
GCCGATGCCG GCGACCCCGC GCAGTACGCC GATCTGGGCC TGCTGATCCG CACCATCGCG
CAGATCGAGG GCATCGGCCG CATCCGCTTC ACCACCTCGC ATCCGCTGGA GTTTTCCGAT
TCGCTGGTGG ATGCCTACCG CGATGTGCCG CAGCTGGCCA ACTGCCTGCA CCTGCCGGTA
CAGGCGGGCA GCGACCGCAT TCTGTCGGCG ATGAAGCGCG GCTACACCGC GCTGGAATTC
AAATCCAGGA TCCGCAAGCT GCGTGCGGTG CGCCCGGATA TTTCGATCAG TTCGGATTTC
ATCGTCGGCT TCCCCGGCGA AACCGAAGCG GACTTCGAAA AGACCATGAA GCTGATCGAG
GACGTGGGCT TCGACCAGAG CTTTTCGTTC GTGTATTCGC GTCGTCCCGG CACCCCGGCA
TCGGACCTGC AAGACGACAC GCCGGAGACG GTGAAGCAGG CGCGTCTTGC ACGTCTGCAG
GCGCACATCA GCGCGCACGC GGCGAGCATT TCGCAATCGA TGGTGGGCAG CGTGCAGCGC
GTGCTGGTGG AAGGCCCCTC GCGGCGCGAC CCGAACGAAT TGACCGGCAA GAGCGAAAAC
ATGCGCCCGG TGAATTTCCC GGGCAACCCG CGTTTGATTG GGCAGTTCGT GGACGTGTTG
ATCACCGAGG CGATGAGCAA TTCGCTGCGT GGTCGCATTC AACTGGACGA CAGCGCGCAC
TGA
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| Protein sequence | MARPSAPAVV RGKLYIKTHG CQMNEYDSAK MADVLAASEG LELTDNPEEA DVVLVNTCSI
REKAQEKVFS QLGRWKALKA GGKPVIIGVG GCVASQEGEA IVKRAPYVDL VFGPQTLHRL
PELIRARRES GKSQVDISFP EIEKFDRLPE PRAEGPSAFV SIMEGCSKYC SFCVVPYTRG
EEVSRPFEDV LVEVAQLAAQ GVREINLLGQ NVNAYRGAYG ADAGDPAQYA DLGLLIRTIA
QIEGIGRIRF TTSHPLEFSD SLVDAYRDVP QLANCLHLPV QAGSDRILSA MKRGYTALEF
KSRIRKLRAV RPDISISSDF IVGFPGETEA DFEKTMKLIE DVGFDQSFSF VYSRRPGTPA
SDLQDDTPET VKQARLARLQ AHISAHAASI SQSMVGSVQR VLVEGPSRRD PNELTGKSEN
MRPVNFPGNP RLIGQFVDVL ITEAMSNSLR GRIQLDDSAH
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