Gene PXO_00439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_00439 
Symbol 
ID6305416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp1961301 
End bp1962044 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content62% 
IMG OID642639185 
Productubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit 
Protein accessionYP_001913058 
Protein GI188576129 
COG category[C] Energy production and conversion 
COG ID[COG2857] Cytochrome c1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.288886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGTCAT GGAAGTCGCG CGTGGCCGCG TTGTTCTGCG GCCTGTTGAT GGCCGGTGGC 
GCAATGGCGG CCGAGGGTGG GGCAGTGCAG CACGCAGGCA ACGACCTGAG CGACCGCGCT
TCGCTGCAAC GGGGGGCGCA GTTGTTCATG AATTACTGCT TCGGCTGCCA TTCGTTGAAA
TACCTGCGTT ATTCGCGCAT GGCCAGCGAT CTGGGCTTGA GCGAAGAAGA GGTCATGACC
AACCTCAACT TCACCGGCGC CAAGGTCGGT GAACACATCG AAGGCACCAT GCCGCACGAT
GCGGCGACCA AGTGGTTTGG CAAGGCGCCG CCGGATCTGA CGTTGATCGC GCGCGTGCGC
GGCACCGACT GGGTCTATAC CTATCTCAAG TCGTTCTATC TGGATCAGAC ACGCCCGCTG
GGCTGGAACA ACAAGCTGTT CCCCAACGCG TCCATGCCTA ATCCGCTATG GGATTTGCAA
GGCTTGCAGC AGGCGCAATT CGGCCCGCCC GACAAGGCGA CCGGCGATAA GCCGGTGGAA
GCGTTGAAGC TCGGGCAGCC TGGCCGCCAG ACGCCGGTGG AGTTCGACCA GACCGTGCGC
GATATCGCCA ACTTCCTGGA GTACGCCGGC GAGCCGGCCG CACTCAAGCG CCAGAGCATG
GGCGTATGGG TGGTCCTGTT TCTGGCGCTG CTCACCTTTC TCGCGTACCT GCTGAAGAAG
GAATATTGGA AGGACGTGCA TTGA
 
Protein sequence
MTSWKSRVAA LFCGLLMAGG AMAAEGGAVQ HAGNDLSDRA SLQRGAQLFM NYCFGCHSLK 
YLRYSRMASD LGLSEEEVMT NLNFTGAKVG EHIEGTMPHD AATKWFGKAP PDLTLIARVR
GTDWVYTYLK SFYLDQTRPL GWNNKLFPNA SMPNPLWDLQ GLQQAQFGPP DKATGDKPVE
ALKLGQPGRQ TPVEFDQTVR DIANFLEYAG EPAALKRQSM GVWVVLFLAL LTFLAYLLKK
EYWKDVH