Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00439 |
Symbol | |
ID | 6305416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1961301 |
End bp | 1962044 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642639185 |
Product | ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit |
Protein accession | YP_001913058 |
Protein GI | 188576129 |
COG category | [C] Energy production and conversion |
COG ID | [COG2857] Cytochrome c1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.288886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGTCAT GGAAGTCGCG CGTGGCCGCG TTGTTCTGCG GCCTGTTGAT GGCCGGTGGC GCAATGGCGG CCGAGGGTGG GGCAGTGCAG CACGCAGGCA ACGACCTGAG CGACCGCGCT TCGCTGCAAC GGGGGGCGCA GTTGTTCATG AATTACTGCT TCGGCTGCCA TTCGTTGAAA TACCTGCGTT ATTCGCGCAT GGCCAGCGAT CTGGGCTTGA GCGAAGAAGA GGTCATGACC AACCTCAACT TCACCGGCGC CAAGGTCGGT GAACACATCG AAGGCACCAT GCCGCACGAT GCGGCGACCA AGTGGTTTGG CAAGGCGCCG CCGGATCTGA CGTTGATCGC GCGCGTGCGC GGCACCGACT GGGTCTATAC CTATCTCAAG TCGTTCTATC TGGATCAGAC ACGCCCGCTG GGCTGGAACA ACAAGCTGTT CCCCAACGCG TCCATGCCTA ATCCGCTATG GGATTTGCAA GGCTTGCAGC AGGCGCAATT CGGCCCGCCC GACAAGGCGA CCGGCGATAA GCCGGTGGAA GCGTTGAAGC TCGGGCAGCC TGGCCGCCAG ACGCCGGTGG AGTTCGACCA GACCGTGCGC GATATCGCCA ACTTCCTGGA GTACGCCGGC GAGCCGGCCG CACTCAAGCG CCAGAGCATG GGCGTATGGG TGGTCCTGTT TCTGGCGCTG CTCACCTTTC TCGCGTACCT GCTGAAGAAG GAATATTGGA AGGACGTGCA TTGA
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Protein sequence | MTSWKSRVAA LFCGLLMAGG AMAAEGGAVQ HAGNDLSDRA SLQRGAQLFM NYCFGCHSLK YLRYSRMASD LGLSEEEVMT NLNFTGAKVG EHIEGTMPHD AATKWFGKAP PDLTLIARVR GTDWVYTYLK SFYLDQTRPL GWNNKLFPNA SMPNPLWDLQ GLQQAQFGPP DKATGDKPVE ALKLGQPGRQ TPVEFDQTVR DIANFLEYAG EPAALKRQSM GVWVVLFLAL LTFLAYLLKK EYWKDVH
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