| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00420 |
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| Symbol | rnd |
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| ID | 6305438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 1977793 |
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| End bp | 1978884 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642639207 |
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| Product | ribonuclease D |
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| Protein accession | YP_001913079 |
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| Protein GI | 188576150 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.966086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCCATT GGATTATCCA CCCCTCCGAG CTGACCGACC GCCTGCAGGC AGCGCGCCCA
GCGCGCATTG GCCTGGATAC CGAATTCATT CGCGAACGCA CCTATTGGCC GCAACTGGCG
CTGGTGCAGA TGGCCATCGG CGAGGAGATC CTGCTGATCG ATCCGCTGAT CCCCGGCATG
AACGCGGCGC TCAAGGAGTG GTTGACCGCC ACCGACATCG TCAAGGTGAT GCATAGCGCC
AGCGAAGACT TGGTCACCTT CAAATGTGCG TGCGGGGTAT TGCCGCGGCC GTTGTTCGAC
ACCCAGATCG CCGCGGCGCT GGCCGGTGTC GGCGGTGGCA TGGGCTACCA GAAACTGGTG
CAGGAAGTGA CCGGCACCTT GCTCACCAAG GGCGAAACAC GCTCGGACTG GATGCGTCGC
CCGCTATCGC CGTCGCAGCT GGAGTACGCC GCCGACGACG TGCGGTACCT GTTTGCGATC
CACGACGAAC TCACCCGTCG CCTCACCGAA CAGAACCGCC TGGGCTGGCT GGCCGAAGAT
GCCGAGCGCC TGCTGGCCAC GGTGGAGCAC GACGATGGCG AACGCTGGCC GCATGTGAGC
CTGCGCACCG CGCAATTCCT GGAACCAGCG GCGCAACGAC GGTTGCTGCG CCTGCTGCGT
TGGCGCGATC TGCAGGCGCG TCAAAGCGAT CGCCCGCGCA GCTGGATTCT GGACAACGAG
CTGGCCAGCC AGCTGGCGCG GTTTCCACCC GCCGATCTGG ACGCCTTGCT GCAGCAGTTC
GATAAATTTC CCAAAGCGCC GCGCAAGCTC GCCAATGCGG TGTGGGACGC GCTCAACACG
CCATTGCCCG ATGAAGAACA TGCGCCATTG GCGCAAGCCG CTACCGACGG CAACAAGGCC
GTGCTCAAGC GCCTACAGGA CACCGTGGCG CAGCGTAGCC GCGAACTTGG CTTGCCGGAT
GGTCTGCTGG CCTCGCGCCG GCACCTGGAA ACCTTGATCG AACAGCGCAG CTGGCCCGCA
GCGCTGGGCC AATGGCGGCG CGCGCTACTG GAAGCGCAGG TGATGCCGCT GCTGGAAGCA
TCCGAAGTGT AA
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| Protein sequence | MPHWIIHPSE LTDRLQAARP ARIGLDTEFI RERTYWPQLA LVQMAIGEEI LLIDPLIPGM
NAALKEWLTA TDIVKVMHSA SEDLVTFKCA CGVLPRPLFD TQIAAALAGV GGGMGYQKLV
QEVTGTLLTK GETRSDWMRR PLSPSQLEYA ADDVRYLFAI HDELTRRLTE QNRLGWLAED
AERLLATVEH DDGERWPHVS LRTAQFLEPA AQRRLLRLLR WRDLQARQSD RPRSWILDNE
LASQLARFPP ADLDALLQQF DKFPKAPRKL ANAVWDALNT PLPDEEHAPL AQAATDGNKA
VLKRLQDTVA QRSRELGLPD GLLASRRHLE TLIEQRSWPA ALGQWRRALL EAQVMPLLEA
SEV
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