Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00418 |
Symbol | |
ID | 6305440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1979321 |
End bp | 1980991 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642639209 |
Product | hypothetical protein |
Protein accession | YP_001913081 |
Protein GI | 188576152 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.56953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGAGTTGG GCGATGAGCC GTTGGCGCAG GTGCGCAAGC GCGCCGAACA GGCATTGCAG GAAGACCGCC TGTATCGCGA TGCCAACGAT GCAATTCCGT TGTATCTGGC GATTCAGCAG CGTGCCGGTG GCAAGGATGT CGCCAGCCGT CGCGGCCTGG AGCAGGCACG CGGCCGGTTG CTCGAACGTG GCGCGGCGTT GATCCAACAG ACCGAGGGTC AGGACGATAC GTTGGAGCAG GCGCGCGAAG TGGCCATTGT CGCGCTCGCC CTCGCACCAC AAGACCCCAA GGTGCGTGCC CTGCAACGCG AAGTGGAAAC CGCGCAGCGT GTATTGGCGT TCAATCGCGC TGGCGAAGAA GACCTGCGCG GCGGACGGCT CGGCGAAGAC GGCAATGGCG CGCTGGTGAA TTTTCGCGAT GCTGCGCACC TGGACCCGGA CAACCCGCGC ACCCGGCAGG GCCTGGCCGC CGTGGAAAGC GGTCTGCTGG AGCGCGCCGA ACAGGCGGCA CAGGCAAGCG ACTACATCGG TGCCCATTAC TGGCTGCAGA TGGCAGGGCA GGTGCGCGAG CGTGCGCCCA CCATTGCCGA TGCGCGCGCG CAGGTGGAGC GTATGCGCCG CGCGCACATT GCCGCCTTGC ATGATGCCGG TTTGCACGAT CTGACCTCGC CGCGCGGGCT CAAGGCAGCC GGCGAAAAAC TTGCCGAAGT GCTGCGCATC GCCGACCCCG GCGACCCGCT GGCTGGCGAT CTGCGTCGCC GCCTGGAGCT GGCCACGCAC TACGGCAGCT TCCGTCCCGG ACAGGTGTTC ACGGACGGAC TCAAGGTCGG CGGGCGCGGC CCACAGATGA TCGTAGTGCC GCATGGCGCA TTTCAGATGG GGCCCGGCGA TGCCGAACCG GGCGCATCCG ACAACGAGCG CCCGGCACAT TACGTGCGCT TCGCGCGCGG CTTTGCGTTG TCGATCACCG AGGTCACGGT CGCCGAGTTC GGTCGGTTCG TCCAGGCCAC CGATGCGCGC CCGCGTGCCA CCCGGCGCGG GCATTCGGTG GTGTACGACG AGCGCAGTGG TAACTTTATC CGCCGCAGCG GCGTGGATTG GCAATCCGAT TACAACGGCG CCCAGGCCGC ACCCAACAGC CCGGTGATGC ACGTGAGCAT TCGTGACGCC GAAGCGTACG CATCCTGGCT GTCGGAACAG ACAGGCCGCC ATTACCACGT GCCCAGCGAG GCCGAGTTCG AATACGCCAT GCGTGCCGGC ACCACCGGGC GCTACCCGTG GGGCAATGCG GGCTCGCCTC CGGCCAATGC CGGCAACTTC ACTGGCGGCA ACGACGTCTC GCGCAGCGGC CGACACTGGA ACAACGGGTT CGTCGGCTAC GGCGACGGAT TCTGGGGTCC GGCGCCGGTC GGCAGCTTTC GCGCTAACGC CTGGGGTCTG CACGACATGG GCGGCAACCT GAGCGAATGG GTGGCCGACT GCTGGCACGC CAGCTACCGT CGTGCGCCAG CCGATGGCGC TGCCTGGTAC AACCCGGGTT GCCGGCAGCG CATGATCCGC GGCGGCAGTT GGGCCAATTC GCCGCAACAG ACACGCGCGG CCTGGCGGCA GTCGCAGGAT TCGGACACCA CCAGTGCGCG TATCGGCTTC CGCCTGGCGC GTGGAATATA G
|
Protein sequence | MELGDEPLAQ VRKRAEQALQ EDRLYRDAND AIPLYLAIQQ RAGGKDVASR RGLEQARGRL LERGAALIQQ TEGQDDTLEQ AREVAIVALA LAPQDPKVRA LQREVETAQR VLAFNRAGEE DLRGGRLGED GNGALVNFRD AAHLDPDNPR TRQGLAAVES GLLERAEQAA QASDYIGAHY WLQMAGQVRE RAPTIADARA QVERMRRAHI AALHDAGLHD LTSPRGLKAA GEKLAEVLRI ADPGDPLAGD LRRRLELATH YGSFRPGQVF TDGLKVGGRG PQMIVVPHGA FQMGPGDAEP GASDNERPAH YVRFARGFAL SITEVTVAEF GRFVQATDAR PRATRRGHSV VYDERSGNFI RRSGVDWQSD YNGAQAAPNS PVMHVSIRDA EAYASWLSEQ TGRHYHVPSE AEFEYAMRAG TTGRYPWGNA GSPPANAGNF TGGNDVSRSG RHWNNGFVGY GDGFWGPAPV GSFRANAWGL HDMGGNLSEW VADCWHASYR RAPADGAAWY NPGCRQRMIR GGSWANSPQQ TRAAWRQSQD SDTTSARIGF RLARGI
|
| |