Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00413 |
Symbol | yjeF |
ID | 6305446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1986405 |
End bp | 1987892 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642639215 |
Product | YjeF family protein |
Protein accession | YP_001913087 |
Protein GI | 188576158 |
COG category | [G] Carbohydrate transport and metabolism [S] Function unknown |
COG ID | [COG0062] Uncharacterized conserved protein [COG0063] Predicted sugar kinase |
TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related [TIGR00197] yjeF N-terminal region |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.108252 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTACGCAC CGCTCGATCT TTACGACACC GCCGCCGCGC GCACGCTCGA TGCGCAGGCC ACCACGCTGC TTGGCGGCGA CGGCTACATC TTGATGCAGC GCGCCGGGCA GGCGGCCTGG CAGTGGTTGC TGGAACGCTG GCCGCAGGCG CGCCGCATCG TGGTGGTGTG CGGCACCGGC AACAATGGTG GCGATGGCTA TGTGCTGGCG CGCCTGGCGC ACCGTGCAGG GCGCCAGGTC CGCGTAGTGG ATCTGCCCGA GCACGGCCCC GGCTCGGACC TGGCGCAGCG TGCCTGCACC GATTACCTGG CGGTCGGCGG CGCGATCGAA TTGTTTCCGT ATCCGCTGGC GCAGGCGGAT GTGATCGTCG ATGCGCTGTT CGGTATCGGC CTGAATCGCG CACCGGACGA CGCTGCCGCT GCGTTGATCG ACGCCATGAA CGCGGCCGGC GTGCCGGTAT TGGCGCTGGA TGTGCCCAGC GGCATCGATG CAGATCACGG GGTCGCTTTC GGCGCCGCGG TAAATGCCGC GCTGACCTTG CAGTTCATCG TGCCGCATCT CGGGCTCTCC ACCGGCGATG CGCTGGAACA CGCCGGCGAA CGTGCAGTCG CGTCGCTGGA GGTGCCGGCT GCCGCATTCG ATGGACTGAC GCCAGCCGCC CACAGTTGGA ATGGCGACGC ACTGAGGGCG CAGTTGCGTC CGCGTCGCCG CAACACGCAC AAAGGCGAAT CCGGGCGGGT GCTATGCGTG GGCGGCAATC TCGGCAGCGG TGGCGCCATC ATGCTCACCG CCGAAGCGGC GTTGCGCAGC GGCGCCGGCT TGGTGCAGGT CGCCACGCGC GCCGAGCATG TGACCCCATT GCTGGCGCGC TGCCCCGAGG CGATGGTGCG CGCCGTGCAG GCCGATGACG ACGTCGCCGC GCTTGCGAAC GCCGCCGATG CGGTCGCGCT CGGGCCCGGG CTAGGGCAGG ACGCCTGGGC ACAAGCGCTG TGGCGCGCGG CGCTGGGCAC CGACACCGCG GTGGTGATCG ACGCCGATGG CTTGAATCTG CTTGCTGGCA ACGCGGTGCC GGCGCGTGGC CCGCGCATTC TGACCCCGCA CCCGGGCGAA GCCGGTCGTT TGCTGGGACG TTCGACCGCG CAGATTCAGC GCGATCGTCC GGCCGCTGCG GCTGCGTTGG CAAAGCGTTA CCACGCAGTG GCGGTGCTCA AGGGCGCCGG GACGGTGGTC GCCGCGCCAG ACGCACTGCC ACGCATCATC GACGCAGGCA ATCCAGGCAT GGCGGTCGGC GGCATGGGCG ATCTATTGAC TGGCGTCATC GCGGCATTGT TGGGGCAGGG CTGGTCGCCA TTCGACGCCG CCAGCCTTGG CGCCTTGCTG CATGCCTGCG CCGGCGATGC AGCTGCGCGC GCCGGCGAGC GCGGCTTACT GCCCACCGAC CTGCTTCCCG AACTGCGCCG CCTCGCCAAC GCTGGAGCCA TTGCGTGA
|
Protein sequence | MYAPLDLYDT AAARTLDAQA TTLLGGDGYI LMQRAGQAAW QWLLERWPQA RRIVVVCGTG NNGGDGYVLA RLAHRAGRQV RVVDLPEHGP GSDLAQRACT DYLAVGGAIE LFPYPLAQAD VIVDALFGIG LNRAPDDAAA ALIDAMNAAG VPVLALDVPS GIDADHGVAF GAAVNAALTL QFIVPHLGLS TGDALEHAGE RAVASLEVPA AAFDGLTPAA HSWNGDALRA QLRPRRRNTH KGESGRVLCV GGNLGSGGAI MLTAEAALRS GAGLVQVATR AEHVTPLLAR CPEAMVRAVQ ADDDVAALAN AADAVALGPG LGQDAWAQAL WRAALGTDTA VVIDADGLNL LAGNAVPARG PRILTPHPGE AGRLLGRSTA QIQRDRPAAA AALAKRYHAV AVLKGAGTVV AAPDALPRII DAGNPGMAVG GMGDLLTGVI AALLGQGWSP FDAASLGALL HACAGDAAAR AGERGLLPTD LLPELRRLAN AGAIA
|
| |