Gene PXO_00413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_00413 
SymbolyjeF 
ID6305446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp1986405 
End bp1987892 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content70% 
IMG OID642639215 
ProductYjeF family protein 
Protein accessionYP_001913087 
Protein GI188576158 
COG category[G] Carbohydrate transport and metabolism
[S] Function unknown 
COG ID[COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.108252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGCAC CGCTCGATCT TTACGACACC GCCGCCGCGC GCACGCTCGA TGCGCAGGCC 
ACCACGCTGC TTGGCGGCGA CGGCTACATC TTGATGCAGC GCGCCGGGCA GGCGGCCTGG
CAGTGGTTGC TGGAACGCTG GCCGCAGGCG CGCCGCATCG TGGTGGTGTG CGGCACCGGC
AACAATGGTG GCGATGGCTA TGTGCTGGCG CGCCTGGCGC ACCGTGCAGG GCGCCAGGTC
CGCGTAGTGG ATCTGCCCGA GCACGGCCCC GGCTCGGACC TGGCGCAGCG TGCCTGCACC
GATTACCTGG CGGTCGGCGG CGCGATCGAA TTGTTTCCGT ATCCGCTGGC GCAGGCGGAT
GTGATCGTCG ATGCGCTGTT CGGTATCGGC CTGAATCGCG CACCGGACGA CGCTGCCGCT
GCGTTGATCG ACGCCATGAA CGCGGCCGGC GTGCCGGTAT TGGCGCTGGA TGTGCCCAGC
GGCATCGATG CAGATCACGG GGTCGCTTTC GGCGCCGCGG TAAATGCCGC GCTGACCTTG
CAGTTCATCG TGCCGCATCT CGGGCTCTCC ACCGGCGATG CGCTGGAACA CGCCGGCGAA
CGTGCAGTCG CGTCGCTGGA GGTGCCGGCT GCCGCATTCG ATGGACTGAC GCCAGCCGCC
CACAGTTGGA ATGGCGACGC ACTGAGGGCG CAGTTGCGTC CGCGTCGCCG CAACACGCAC
AAAGGCGAAT CCGGGCGGGT GCTATGCGTG GGCGGCAATC TCGGCAGCGG TGGCGCCATC
ATGCTCACCG CCGAAGCGGC GTTGCGCAGC GGCGCCGGCT TGGTGCAGGT CGCCACGCGC
GCCGAGCATG TGACCCCATT GCTGGCGCGC TGCCCCGAGG CGATGGTGCG CGCCGTGCAG
GCCGATGACG ACGTCGCCGC GCTTGCGAAC GCCGCCGATG CGGTCGCGCT CGGGCCCGGG
CTAGGGCAGG ACGCCTGGGC ACAAGCGCTG TGGCGCGCGG CGCTGGGCAC CGACACCGCG
GTGGTGATCG ACGCCGATGG CTTGAATCTG CTTGCTGGCA ACGCGGTGCC GGCGCGTGGC
CCGCGCATTC TGACCCCGCA CCCGGGCGAA GCCGGTCGTT TGCTGGGACG TTCGACCGCG
CAGATTCAGC GCGATCGTCC GGCCGCTGCG GCTGCGTTGG CAAAGCGTTA CCACGCAGTG
GCGGTGCTCA AGGGCGCCGG GACGGTGGTC GCCGCGCCAG ACGCACTGCC ACGCATCATC
GACGCAGGCA ATCCAGGCAT GGCGGTCGGC GGCATGGGCG ATCTATTGAC TGGCGTCATC
GCGGCATTGT TGGGGCAGGG CTGGTCGCCA TTCGACGCCG CCAGCCTTGG CGCCTTGCTG
CATGCCTGCG CCGGCGATGC AGCTGCGCGC GCCGGCGAGC GCGGCTTACT GCCCACCGAC
CTGCTTCCCG AACTGCGCCG CCTCGCCAAC GCTGGAGCCA TTGCGTGA
 
Protein sequence
MYAPLDLYDT AAARTLDAQA TTLLGGDGYI LMQRAGQAAW QWLLERWPQA RRIVVVCGTG 
NNGGDGYVLA RLAHRAGRQV RVVDLPEHGP GSDLAQRACT DYLAVGGAIE LFPYPLAQAD
VIVDALFGIG LNRAPDDAAA ALIDAMNAAG VPVLALDVPS GIDADHGVAF GAAVNAALTL
QFIVPHLGLS TGDALEHAGE RAVASLEVPA AAFDGLTPAA HSWNGDALRA QLRPRRRNTH
KGESGRVLCV GGNLGSGGAI MLTAEAALRS GAGLVQVATR AEHVTPLLAR CPEAMVRAVQ
ADDDVAALAN AADAVALGPG LGQDAWAQAL WRAALGTDTA VVIDADGLNL LAGNAVPARG
PRILTPHPGE AGRLLGRSTA QIQRDRPAAA AALAKRYHAV AVLKGAGTVV AAPDALPRII
DAGNPGMAVG GMGDLLTGVI AALLGQGWSP FDAASLGALL HACAGDAAAR AGERGLLPTD
LLPELRRLAN AGAIA