| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00408 |
|---|
| Symbol | |
|---|
| ID | 6305451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 1993177 |
|---|
| End bp | 1994148 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642639220 |
|---|
| Product | GumN protein |
|---|
| Protein accession | YP_001913092 |
|---|
| Protein GI | 188576163 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3735] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGGA AACGGACAAC CTCGACGCGC CAGCGTGTTG CCGCCTGGTG CAGCGGCGCG
CTGCTCGGCC TGAGCTTGTG GAGCGGGGCG CTCGTGCCAG CGTGGGCACG CGGTGCAAGC
GATACACCGG CCGGCCCGCC CGTGCCGCTG CTATGGAAGG TCGATGGCAA GGGCGGCACC
CTGTATGTGC TGGGCTCGTT CCATGTGCTC AAGCCCAGCG ACTACCCGCT ATCGCCGGAT
GTGATGCAGG CCTTCGCCAA GGCCGACCGG CTGCTGTTCG AGCTGCCGCC TGACGACGCA
CAATCGCCTG AGCTAGCCGG TCGCATGCTG CAGGCCGCGC GGCGCACCGA TGGGCGCACG
CTGCAGGACA CGCTGGACGC AAAAACCTGG CAGTCACTGA GTGCCTATGC ACGCAGGTAC
GGCATGCCGC TGGAGAGCTT GCAGCCGTTC AAGCCGTGGT TCGTGGCGCT GACGATCAGC
CTGGCCGAGA TGAGCCGACA AGGCATGGAC CCGAACGCGG GGCTGGACCA TTACCTGATG
CAACAGGCGC AGGCGCGCGG CAAACCGGCC GATGGCCTGG AGCGCGCCGC CGAACAGATC
GCCTTGCTCG ATGGCATGTC GCCGACCGAG CAGCATCAGT TGCTGGAAGA GTCGCTGGAC
GAGGCCGATG CCACCGACCA GCTACGCCAG CTGCATGCAG CCTGGCGCAA TGGCGACGTG
CATACGCTGT CCACGCAAAT GGCCGAGGAC ATGCGTCGCC AGTATCCGGC GCTGTATCAG
GACATCAATG TCGAGCGCAA TGCGCGCTGG GTGCCGCGTC TGGAACAGCG GCTCGGCAAA
GGCGGCACCA CACTGGTAGT GGTCGGCGCG CTGCATTTGC TGGGGAACGA CGGGATCGTG
GAGCGTCTGC GCGCGCGCGG CTACCACGTG GAGCGGATCT GCTCGGCCTG CGCAAAGCAG
GCCGGCCGCT GA
|
|---|
| Protein sequence | MTGKRTTSTR QRVAAWCSGA LLGLSLWSGA LVPAWARGAS DTPAGPPVPL LWKVDGKGGT
LYVLGSFHVL KPSDYPLSPD VMQAFAKADR LLFELPPDDA QSPELAGRML QAARRTDGRT
LQDTLDAKTW QSLSAYARRY GMPLESLQPF KPWFVALTIS LAEMSRQGMD PNAGLDHYLM
QQAQARGKPA DGLERAAEQI ALLDGMSPTE QHQLLEESLD EADATDQLRQ LHAAWRNGDV
HTLSTQMAED MRRQYPALYQ DINVERNARW VPRLEQRLGK GGTTLVVVGA LHLLGNDGIV
ERLRARGYHV ERICSACAKQ AGR
|
|---|
| |