| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00394 |
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| Symbol | |
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| ID | 6305465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 2007460 |
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| End bp | 2008836 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642639234 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_001913106 |
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| Protein GI | 188576177 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.793694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAAT TCTCCGCGCT GCCGCTGTCG CCGGCCCTGG CCCCCGGCAT CGACGCCCTG
GGCTACACCG TCCTGACTCC CGTCCAGGCG CAGAGCCTGC CGCCGATCCT GCGGGGGCTC
GATGTCATCG CGCAGGCGCC GACCGGCAGC GGCAAGACTG CCGCGTTCGG GCTTGGCCTG
CTGCAAAAGC TCGACCCCGC ACTGACCCGC GCGCAAGCGC TGGTGCTCTG CCCCACCCGC
GAGCTGGCCG ATCAGGTCGG CAAGCAACTG CGCAAACTCG CCACTGGCAT CCCCAACATG
AAATTGGTGG TACTCACCGG CGGCATGCCG CTGGGCCCAC AGCTGGCCTC GCTGGAAGCG
CACGACCCGC ACGTGGTGGT CGGTACGCCC GGGCGCATCC AGGAGCTGGC GCGCAAACGC
GCCCTGCATC TGGGCGGCGT GCGCACCCTG GTGCTGGACG AGGCCGACCG CATGCTCGAC
ATGGGCTTCG AAGAACCCAT CCGCGAGATT GCCAGCCGCT GCGACAAACA CCGCCAGAGC
CTGCTGTTTT CGGCCACGTT CCCCGACATC ATCCGCACCC TGGCGCGCGA GATCCTGAAA
GACCCGATTG AAATCACCGT CGAAGGCGCC GACAACGCGC CGGAAATCGA TCAGCAGTTC
TTCGAGGTCG ATCCCACCTA TCGGCAGAAA GCGGTAGCCG GCTTGCTGCT GCGCTTCACC
CCCGAATCCA GCGTGGTGTT CTGCAATACC CGCAAGGAAG TGGATGAAGT GGCCGGCTCG
CTGCAGGAGT TCGGCTTCTC CGCGCTAGCC CTGCACGGCG ACATGGAGCA GCGCGACCGC
GATGAGGTGC TGGTGCGTTT CGTCAACCGC AGCTGCAACG TGTTGGTGGC CAGCGACGTG
GCAGCACGCG GATTGGACGT GGAAGACCTC TCGGCCGTGG TCAATTACGA GCTGCCCACC
GATACCGAAA CCTACCGCCA TCGCATCGGC CGCACCGCGC GTGCAGGCAA GCACGGGCTG
GCATTAAGCC TGGTCGCCCC GCGTGAAACC GCGCGCGCCC AAGCGCTGGA AGCCGAACAA
GGCCAGCCCT TGAAGTGGTC GCGTGCACCA CTGGCCACCG CACGCCCCGC GCAGCTGCCG
CAGGCGGCAA TGACCACCTT GCGCATCGAC GGCGGCAAGA CCGACAAGCT GCGTGCCGGC
GACATCCTCG GTGCATTGAC CGGCGAAGCC GGACTCTCGG GCGCGGCGAT CGGCAAGATC
GCCATCTACC CCACCCGCTC CTACGTCGCC ATCGCGCGCG CGCAGGTCGC CAAGGCGCTG
GCACATCTGC ACGCCGGCAA GATCAAGGGG CGCCGGTTCC GGGTCAGCAA GCTCTGA
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| Protein sequence | MNEFSALPLS PALAPGIDAL GYTVLTPVQA QSLPPILRGL DVIAQAPTGS GKTAAFGLGL
LQKLDPALTR AQALVLCPTR ELADQVGKQL RKLATGIPNM KLVVLTGGMP LGPQLASLEA
HDPHVVVGTP GRIQELARKR ALHLGGVRTL VLDEADRMLD MGFEEPIREI ASRCDKHRQS
LLFSATFPDI IRTLAREILK DPIEITVEGA DNAPEIDQQF FEVDPTYRQK AVAGLLLRFT
PESSVVFCNT RKEVDEVAGS LQEFGFSALA LHGDMEQRDR DEVLVRFVNR SCNVLVASDV
AARGLDVEDL SAVVNYELPT DTETYRHRIG RTARAGKHGL ALSLVAPRET ARAQALEAEQ
GQPLKWSRAP LATARPAQLP QAAMTTLRID GGKTDKLRAG DILGALTGEA GLSGAAIGKI
AIYPTRSYVA IARAQVAKAL AHLHAGKIKG RRFRVSKL
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