Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00390 |
Symbol | |
ID | 6305469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 2011692 |
End bp | 2012132 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642639238 |
Product | ribonuclease |
Protein accession | YP_001913110 |
Protein GI | 188576181 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG4290] Guanyl-specific ribonuclease Sa |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.42754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAAGC CCGCGTTGCT CATTGTCGCC ATCGCGCTGC TCGTCGCCGG GCTGTGGGGC ATGCGCGCAA TGCAGACGCC CAAGCCGCAG TTCGCGCCGC AACTCAACGC ACCGAGCACC GCGACCGCAC CGACGCGCGA GGTGCCGCGT CTGCCCGCCT TTCTGCCGAC CGAGGCGATG GCCGCGATCG TGCTGATCCA GCACGGCGGG CCGTTCCCGC ATCCACAGGA CGGCGGCGTG TTCGGCAACC GCGAGCATCG CCTGCCCGAG CGCCCGCGTG GTTATTACCG CGAATACACC GTGGATACGC CCGGCAGTCC GGATCGCGGC GCACGCCGCA TCGTCACCGG CGGTACCCCG CCCGAGGCGT GGTACTACAG CGACGATCAT TACCAAAGCT TCAAAGCCTT CAATGGCGCC ACCCCGGATC AGGCACCATG A
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Protein sequence | MRKPALLIVA IALLVAGLWG MRAMQTPKPQ FAPQLNAPST ATAPTREVPR LPAFLPTEAM AAIVLIQHGG PFPHPQDGGV FGNREHRLPE RPRGYYREYT VDTPGSPDRG ARRIVTGGTP PEAWYYSDDH YQSFKAFNGA TPDQAP
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