Gene PXO_00389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_00389 
SymbolsodM 
ID6305470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand+ 
Start bp2012387 
End bp2012998 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content61% 
IMG OID642639239 
Productsuperoxide dismutase 
Protein accessionYP_001913111 
Protein GI188576182 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.283594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTACA CCCTTCCGCA GTTGCCCTAC GCCTACGACG CGCTGGAACC GAACATCGAT 
GCGCAGACGA TGGAAATCCA TCACACCAAG CATCATCAGA CCTACATCAA CAACGTCAAT 
GCGGCGCTGG AAGGGACTGA GTACGCCGAT CTGCCGATCG AAGAGCTGGT CTCCAAGCTG 
AAGAGCCTGC CGGAAAACCT GCAGGGCCCG GTGCGCAACA ACGGTGGCGG CCACGCCAAC 
CATTCGCTGT TCTGGACCGT GTTGTCGCCC AACGGCGGCG GCGAGCCCAA GGGCGAGGTC 
GCCAAGGCGA TCGACAAGGA CATCGGTGGG TTCGAGAAGT TCAAGGAAGC GTTCACCAAG 
GCCGCCGTCA GCCGTTTCGG CTCGGGTTGG GCATGGTTGA GCGTGACCCC GGACAAGAAG 
CTGGTGGTGG AAAGCACCGC CAACCAGGAC AGCCCGCTGT TCGAAGGCAA TACCCCGATC 
CTGGGCCTGG ACGTGTGGGA ACACGCGTAT TATCTGAAGT ATCAGAACCG CCGCCCGGAA 
TACATCGGCG CGTTCTACAA CGCCGTCAAC TGGGAAGAAG TCGAGCGCCG CTACCACGCT 
GCGATCGCCT GA
 
Protein sequence
MAYTLPQLPY AYDALEPNID AQTMEIHHTK HHQTYINNVN AALEGTEYAD LPIEELVSKL 
KSLPENLQGP VRNNGGGHAN HSLFWTVLSP NGGGEPKGEV AKAIDKDIGG FEKFKEAFTK 
AAVSRFGSGW AWLSVTPDKK LVVESTANQD SPLFEGNTPI LGLDVWEHAY YLKYQNRRPE 
YIGAFYNAVN WEEVERRYHA AIA