| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00378 |
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| Symbol | gph |
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| ID | 6305481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 2023105 |
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| End bp | 2023857 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642639250 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_001913122 |
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| Protein GI | 188576193 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.590108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGATTCG CAACGGCCGT TGGTTGGGGT CTTGATGGTC CCGGTGGCGT GCCGGGCGAT
ACGCAATTGA CTACAGATGT GGCTGCTGCG GATTTTCCGC GGGTGGTGCT ATTCGATCTG
GATGGCACCT TGCTGGACAG TGCGCCGGAT ATGCTGGCCA CGGTCAACGC GATGCTGGAC
GCGCGTGGCC GTGCGCCGAT TGCGTTGGCC TCGTTGCGTC CAGTGGTCTC CAAAGGTGCG
CGTGCGATGC TCGGTGTGGC CTTTGCCGAG CTCGATGCCG AGGCGTGCGT TGCACTGGTG
CCGGAATTCT TGCAGCGCTA TGAAGACGTG ATCGGCACGC AGTCGCAGCT GTTCGACGGT
GTCGAAGAAC TAATGGTGCG ACTGGAGAAT GCCGGTTGCG TCTGGGGCAT CGTGACCAAC
AAGCCGGAAT ATCTGGCGCG GCTGATCCTG CCGCAGTTGG GCTGGGAACA GCGCTGCGCG
GTGCTGATCG GCGGCGACAC GCTGGCCGAG CGCAAGCCGC ATCCATTGCC GCTGCTGGCG
GCCGCCGAAC GTATCGGCGT TGCGCCCGCG CAATGCGTGT ATGTCGGCGA CGATGCGCGC
GACATTCTGG CTGCACGGGC GGCGGCGATG CCGTCGGTCG CGGTGTTGTG GGGCTACCGC
CTGGACGACG ACGACCCATT GCGCTGGCAG GCCGACGTGC TGGTCGAACA GCCGCAGGCG
CTGTGGAATC CCGCAACGTG GCCGCAAACC TGA
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| Protein sequence | MGFATAVGWG LDGPGGVPGD TQLTTDVAAA DFPRVVLFDL DGTLLDSAPD MLATVNAMLD
ARGRAPIALA SLRPVVSKGA RAMLGVAFAE LDAEACVALV PEFLQRYEDV IGTQSQLFDG
VEELMVRLEN AGCVWGIVTN KPEYLARLIL PQLGWEQRCA VLIGGDTLAE RKPHPLPLLA
AAERIGVAPA QCVYVGDDAR DILAARAAAM PSVAVLWGYR LDDDDPLRWQ ADVLVEQPQA
LWNPATWPQT
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