| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00333 |
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| Symbol | cydC |
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| ID | 6305527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 2065302 |
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| End bp | 2066987 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642639295 |
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| Product | ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC |
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| Protein accession | YP_001913166 |
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| Protein GI | 188576237 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGCA CCCGACCCGA TCGTCTGCGC GATGTGTTTC GTCGGCACGC CTGGCGTCTG
CTGCTCTCCG CGCTATTGGT CCTGGTCACC ATGCTCGCGG GTGTCGGCTT GCTGTGGCTA
TCCGGCAGCT TCCTGACCGC AGCGGCGCTG GCAGGCGTGG CCGGCATGGG CACCGGCTTC
AATTTCTTCT CGCCGTCGGC CGGCATTCGC GCCTTGACCT TCGCGCGCAT CGCATCGCGT
TATGGCGAAA AATTGATCGG GCACGATGCC ACTCTGCGCA TCGCCCGCGA TCTGCGGGTG
TGGTTTTTCC GCCGCGCGTT GCCGTTGGCG CCAGGGCGCT TGTCGGCCAC CCGCACCGGA
GATCTGCTGG CGCGGCTGAT GTCCGACATC GGCGAGGTCG ATGGACTCAG CGTGCGCGCC
TTGGCACCGC TGGCGGCCTT GCTTGGCATC TGGCTGGCCG GTATTGCCGC CGCGGCGCTG
ATTCATCTGC CCGCTGCGGG ATTGCTGCTG GTGCTCGGCG TGCTGATCGG TGGTCTGGTG
CCGTGGCAGG TGGCACGCGG CGGCGCGCAG CGCGAGCACT TGCGTGCACA GCAACGCACC
GCCTTGCGCA CGCAGGCGTT CGAAGGCCTG GAAGGCGCGG CCGATCTTGC TGCGGTCGAT
GCGCAAGGTG CCTGGCTGCA ACAGATCGAC GCTGCGGCCG CCGCGGTGAT TGCAGGCGAT
CGCATCCAGC GGCGCCGGCT GATCACCGGC AACCTGCTGC ATGCGTTCTG CGCAGGCGTG
GGTCTGGCCG GCATGCTGTG GCTCGCACTC AGCGCTGCCG ACCGCGGGCT GATCGCTGCC
GAGCTGGCTG CAGGCCTGGT GTTCTTGACC ATGGCCTTGC TGGAAGTATG GGCCGGTGCC
GGGTTGGCGC TGCAGGCGCT GCAAAGCGCG CGTGGTGCGG CGAAGCGCTT GCAGGCGATC
GTGGATCAAG CGCCATCGGT CAGTGAACCT GTGCACGCAC TCGATGTGCC ACGCACTGGC
ACGCTGCAAT TGCAGCAGGT GTCGTTTGCA TGGCCCGGTA GCGTGCGCCC GGTATTGCAC
GCTCTCGATC TGACGCTCGC GCCGGGCGAG CGCATCGCCA TCAGCGGCGA CAGCGGCAGT
GGTAAAAGTA CGTTGTCGGC GCTGCTGCTC CGGCTGTGGG ATCCGCAGGA AGGGCAACTG
CGCTACGCCG GCATCGACCT GCGCCACGTC GCGCAAACGC AATGGCATCA GCGAATTGCC
TGGCTGCCGC AGAACGCGCC GGTGTTTGCC GGCAGCGTGC GCGAGAACCT CCTCATCGGC
GACGCCGCTG CCGACGATGC CGCCCTGTGG CAGGTGCTCG AACAGGTACG CCTGAGCGCA
TGGGCCAGCG CGCACAACGG CCTGGACACC TGGGTCGGCG AAAACGGCGC CACGCTGTCT
GCCGGCCAGG CGCGTCGCCT CGCACTTGCA CGCGCACTGC TGCGCAATGC GCCGATCCTG
CTGCTCGACG AGCCCACCGA TGGCCTGGAC GTGGAGACTG CACACGCGCT GCTGCTCGAC
CTGGCCGCCG CTCTCGGCGA ACGCAGCCTG GTGATGATCA CCCACGACGC GCTACCGCCC
GGTGTGGTGC AACGGCATTA CCGGATGCGT GAGGGAGCGT TGGAGTTGTT GAATCAGAGC
GCGTAG
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| Protein sequence | MSRTRPDRLR DVFRRHAWRL LLSALLVLVT MLAGVGLLWL SGSFLTAAAL AGVAGMGTGF
NFFSPSAGIR ALTFARIASR YGEKLIGHDA TLRIARDLRV WFFRRALPLA PGRLSATRTG
DLLARLMSDI GEVDGLSVRA LAPLAALLGI WLAGIAAAAL IHLPAAGLLL VLGVLIGGLV
PWQVARGGAQ REHLRAQQRT ALRTQAFEGL EGAADLAAVD AQGAWLQQID AAAAAVIAGD
RIQRRRLITG NLLHAFCAGV GLAGMLWLAL SAADRGLIAA ELAAGLVFLT MALLEVWAGA
GLALQALQSA RGAAKRLQAI VDQAPSVSEP VHALDVPRTG TLQLQQVSFA WPGSVRPVLH
ALDLTLAPGE RIAISGDSGS GKSTLSALLL RLWDPQEGQL RYAGIDLRHV AQTQWHQRIA
WLPQNAPVFA GSVRENLLIG DAAADDAALW QVLEQVRLSA WASAHNGLDT WVGENGATLS
AGQARRLALA RALLRNAPIL LLDEPTDGLD VETAHALLLD LAAALGERSL VMITHDALPP
GVVQRHYRMR EGALELLNQS A
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