Gene PXO_00323 details

Gene Information

• Locus tag: PXO_00323
• ID: 6305542
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 2074146
• End bp: 2077646
• Gene Length: 3501 bp
• Protein Length: 1166 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642639310
• Product: RND superfamily protein
• Protein accession: YP_001913177
• Protein GI: 188576248
• COG category: [V] Defense mechanisms
• COG ID: [COG0841] Cation/multidrug efflux pump

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAGA ACGGCAACCC GCACGGACCC GTGCATGATC CGCATGCGCC ACTGCCTGGC 
GGCGGTGGCG GCGGTGGCGG CGTGGTCGCC TTCGCCACGC GGCGACGGGT GACCATCGCC 
ATGATCACCG TGACCATGCT GCTGTTCGGC CTGATCGCGC TGCGCAGCCT CAAGGTCAAC 
CTGCTACCGG ATCTGAGCTA TCCCACGCTC ACCGTGCGCA CCGAATACAC CGGTGCGGCG 
CCGGCGGAAA TCGAGACGCT GGTGACCGAG CCGGTGGAAG AAGCCGTCGG CGTGGTCAAG 
AACCTGCGCA AGCTCAAATC GATTTCGCGC ACCGGACAGA GCGATGTGGT GCTGGAATTC 
GCGTGGGGCA CCAACATGGA CCAGGCCAGC CTGGAGGTGC GCGACAAGAT GGAAGCGTTG 
TCGCTGCCGC TGGAAACCAG GCCGCCGGTG CTGCTGCGCT TCAATCCGTC CACCGAGCCG 
ATCATGCGGC TGGCGTTGTT GCCCAAGCAG GCGCCGGCCT CTGATACCGA TGCGATCCGC 
CAGCTCACCG GTTTGCGCCG TTATGCCGAT GAAGACCTGA AAAAGAAGCT TGAGCCAGTG 
GCTGGCGTAG CCGCGGTGAA GGTGGGCGGC GGGCTGGAAG ACGAGATCCA GGTCGACATC 
GATCAGCAGA AGTTGGCCCA GCTCAACCTG CCGATCGATA ACGTCATCAC CCGGCTCAAG 
GAAGAGAACG TCAATATCTC CGGCGGTCGG CTGGAAGAAG GCTCGCAGCG GTACCTGGTG 
CGCACGGTCA ACCAGTTCGT GGATCTGGAC GAGATCCGCA ACATGCTGGT GACCACGCAG 
AGCAGCAGCG GCAGCGCGGC GGAAGCGGCG ATGCAGCAGA TGTATGCAAT CGCTGCTTCC 
ACCGGATCGC AGGCGGCGTT GGCGGCAGCG GCCGAAGTAC AAAGCACGTC TTCGTCGTCC 
AGCAGCAGCA TTGCCGGCGG CATGCCGGTG CGCTTGAAGG ATGTGGCACA GGTGCGCCAG 
GGCTACAAGG AACGCGAGGC CATCATTCGC CTGGGCGGCA AGGAAGCGGT GCAGCTGGCG 
ATCTACAAGG AAGGCGATGC CAACACCGTG TCCACGGCGG CGGCGCTGCG CAAGCGCCTG 
CAGCAACTCA AAGCAACGGT GCCGGACGAT GTGGAAATCA CCACCATCGA AGACCAGTCG 
CACTTCATCG AACATGCGAT CAGCGATGTC AAAAAAGATG CGGTGATCGG CGGTGTGCTG 
GCGATCCTGA TCATCTTCCT GTTCCTGCGC GATGGCTGGA GCACGTTCGT GATCAGCCTT 
TCGTTGCCAG TGTCCATCAT TACCACGTTC TTTTTCATGG GCCAGCTGGG ACTGGGCCTC 
AACGTGATGT CGCTGGGCGG GTTGACATTG GCTACCGGCC TGGTGGTGGA CGATTCGATC 
GTGGTGCTGG AAAGCATCGC CAAGGCGCGC GAGCGTGGCT TGAGCGTGTT GGACGCGGCC 
ATTGCCGGCA CCCGTGAAGT GAGCATGGCG GTGATGGCGT CGACGTTGAC CACCATTGCG 
GTGTTCCTGC CGCTGGTGTT CGTCGAAGGC ATCGCCGGAC AGCTGTTCCG CGATCAGGCA 
TTGACAGTGG CGATCGCGAT CGCGATTGCG ATTTCGCTGG TGGTGTCGAT GACGCTGATT 
CCGATGCTGA GCTCGCTCAA GGGCGCGCCG CCGATGGCGT TCCCGGAGGA GCCGAGCCAT 
CCGCAGTGGC AGCCCGAGCA GTGCTGGCTC AAGCCGGTGG CGGCCGGGCG GCGCGGCGCC 
GGTGCGAGCG TGCGTTATGC GTTCTTCGGC GCGGCGTGGG CGGTGGTGAA GGTCTTGCGC 
GGGTTGAGCC GCGTGGTGGG GCCGGTGATG CGCAAGGCGA GCGACCTGGC GATGGCGCCG 
TATGCTCGCG CCGAGCGTGG CTATCTGGCG ATGTTGCCGG CGGCGCTGTG GCGTCCCGGG 
TTGGTGCTGG GACTGGCAGC CGCGGCGTTC ATCGGAACTG TCTTTCTGGT GCCGATGTTG 
GGTGTGGATC TGATTCCGCA GCTTGCGCAA GATCGCTTCG AAATGACCGT CAAACTGCCT 
TCCGGCACAC CGCTGGCACG GACCGATGCA CTGGTGCGCG AGTTGCAGCT GGCGCACGAC 
AAGGACCCGG GCGTCGCCTC ACTGTACGGC GTCAGCGGTA GCGGCACGCG GTTGGATGCC 
AACCCCACCG AGAGCGGCGA AAACATCGGC AAGCTCACCG TGGTGATGGC CGGTGGTGGC 
AGCCCGGCAG TGGAAGCGGC AGCGACCGAG CGGCTGCGCA GCAGCATGGT CGGGCACCCG 
GGCGCGCAGG TGGATTTCGC GCGGCCGGCG TTGTTCAGTT TTTCGACGCC GCTGGAAGTG 
GAACTGCGCG GTCAGGATCT GGGCGAGCTG GAACGCGCCG TGCAGAAGTT GGCCGCGATG 
CTGCGTGCCA ACGGCCACTA CGCCGACGTC AAATCGACGG TGGAAGAGGG CTTCCCGGAA 
ATCCAGATCC GTTTCGATCA AGAGCGCGCC GGTGCGCTGG GGCTGACCAC ACGTCAGATT 
GCCGATGTCA TCGTCAAGAA GGTGCGCGGC GATGTGGCCA CGCGCTACAG CTTCCGCGAC 
CGCAAGATCG ATGTGTTGGT GCGCGCGCAG CAAAGCGACC GCGCCAGTGT CGATGCGATT 
CGTCAGTTGA TCGTCAACCC GGGCAGCAGC CGGCCGGTGC GTTTGGCGGC CGTTGCCGAG 
GTATTGGCGA CGACGGGGCC GAGCCAGATC CACCGCGCCG ATCAGACCCG CGTGGCGATC 
GTGTCGGCCG GCCTGAAGGA CATCGACCTG GGCGGTGCGG TGCGCGAAGT GGAAACGATG 
GTGCGTAAGG ACCCGCTCGC TGCCGGCGTG GGCATGCATA TCGGCGGGCA GGGCGAGGAG 
CTGGCGCAAT CGGTGAAGTC GCTGCTGTTC GCGTTCGGCC TGGCGATCTT TCTGGTCTAC 
CTGGTGATGG CCTCGCAGTT CGAATCGCTG CTGCATCCAT TCGTCATCCT GTTCACCATT 
CCACTGGCGA TGGTGGGTGC GGCTGGCCCT GCTGATGACC GGCAAGCCGA TCTCGGTGGT 
GGTGTTCATC GGCCTGATTT TGCTGGTGGG CCTGGTGACC AAGAATGCGA TCATCCTGAT 
CGACAAGGTC AACCAGTTGC GCGAAGACGG CATGCCCAAG CGCGAGGCAT TGATCGAAGG 
TGCGCGCTCG TGCCTGCGGC CGATCATCAT GACCACGTTG TGCACCTTGT TCGGCTTCCT 
GCCGCTGGCG GTAGCGATGG GCGAGGGCGA GGAGGTGCGT GCGCCGATGG CGATCACCGT 
GATCGGCGGG TTGCTGGTGT CGACCTTGCT GACCTTGTTG GTCATCCCGG TGGTGTACGA 
CCTGCTGGAT CGCCGCGCCG ATGCGTACTA CCTGGAGCGC GGCCGGCGCA TGGCCGGGCA 
GCGTGCACAG GCGGCGAATA A 

 

Protein sequence

MSENGNPHGP VHDPHAPLPG GGGGGGGVVA FATRRRVTIA MITVTMLLFG LIALRSLKVN 
LLPDLSYPTL TVRTEYTGAA PAEIETLVTE PVEEAVGVVK NLRKLKSISR TGQSDVVLEF 
AWGTNMDQAS LEVRDKMEAL SLPLETRPPV LLRFNPSTEP IMRLALLPKQ APASDTDAIR 
QLTGLRRYAD EDLKKKLEPV AGVAAVKVGG GLEDEIQVDI DQQKLAQLNL PIDNVITRLK 
EENVNISGGR LEEGSQRYLV RTVNQFVDLD EIRNMLVTTQ SSSGSAAEAA MQQMYAIAAS 
TGSQAALAAA AEVQSTSSSS SSSIAGGMPV RLKDVAQVRQ GYKEREAIIR LGGKEAVQLA 
IYKEGDANTV STAAALRKRL QQLKATVPDD VEITTIEDQS HFIEHAISDV KKDAVIGGVL 
AILIIFLFLR DGWSTFVISL SLPVSIITTF FFMGQLGLGL NVMSLGGLTL ATGLVVDDSI 
VVLESIAKAR ERGLSVLDAA IAGTREVSMA VMASTLTTIA VFLPLVFVEG IAGQLFRDQA 
LTVAIAIAIA ISLVVSMTLI PMLSSLKGAP PMAFPEEPSH PQWQPEQCWL KPVAAGRRGA 
GASVRYAFFG AAWAVVKVLR GLSRVVGPVM RKASDLAMAP YARAERGYLA MLPAALWRPG 
LVLGLAAAAF IGTVFLVPML GVDLIPQLAQ DRFEMTVKLP SGTPLARTDA LVRELQLAHD 
KDPGVASLYG VSGSGTRLDA NPTESGENIG KLTVVMAGGG SPAVEAAATE RLRSSMVGHP 
GAQVDFARPA LFSFSTPLEV ELRGQDLGEL ERAVQKLAAM LRANGHYADV KSTVEEGFPE 
IQIRFDQERA GALGLTTRQI ADVIVKKVRG DVATRYSFRD RKIDVLVRAQ QSDRASVDAI 
RQLIVNPGSS RPVRLAAVAE VLATTGPSQI HRADQTRVAI VSAGLKDIDL GGAVREVETM 
VRKDPLAAGV GMHIGGQGEE LAQSVKSLLF AFGLAIFLVY LVMASQFESL LHPFVILFTI 
PLAMVGAAGP ADDRQADLGG GVHRPDFAGG PGDQECDHPD RQGQPVARRR HAQARGIDRR 
CALVPAADHH DHVVHLVRLP AAGGSDGRGR GGACADGDHR DRRVAGVDLA DLVGHPGGVR 
PAGSPRRCVL PGARPAHGRA ACTGGE