| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00319 |
|---|
| Symbol | |
|---|
| ID | 6305546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 2082220 |
|---|
| End bp | 2083392 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642639314 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_001913181 |
|---|
| Protein GI | 188576252 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCACA CCCAGAACGC CGACTTCTTC CGCCAGCCCT TGGCCGAGAT GATCGATCCG
CGCCACCCGC TGGCGGTGCT GGCCCGTCGG CTGCCCTGGG CGCAGATCGA GGCGGTGTTG
GCGCCGCATT TCGCTCGCAA GGTGCGCGCA GGTCGCGCGG TGGCGCAACA CGATCTGTTC
GGCCCCTCGG TGCAAGTGGC CGGTGCCGGT ATTGCCGCTG CCGGCCGCCC ACGCCTTCCC
ATTCGCTTGA TGGCCAGCCT GTTGGACCTG AAGCACGCTT ACAAGCTCAG CGACGAGGAA
CTGGTGGAGC GCTGGGCCCA GAACGTGGTC TGGCAGCACT TCAGCGGCAT GGCGTTCTAT
GAGCCGCGCC TGCCCTGCGA TGCCACGCAG GTCGGGCGTT TTCGCGCGGC CATCGGTGAG
GCCGGGGTCG AGGAACTGCT CAAGGCCACC ATCGACACCG CGGTGTCCTC CAAGGCCATC
GTGCCCGCCG AGTTCGAACG GCTGATCGTG GACACCACCG TGCAGGAGAA GGCCATTGCT
CATCCGGTGG ATTGGCGCCT GATGGAGAAC GCGCGGCACA AGCTGGTGGC GGCGGCCAAG
CGCGCGGGCA TCGCGCTCAA GCAGACCTTC GCCAAAGAAA CCAAGACGCT GCGGCGCAAA
GCCGGCGGCT ACGCCCATGC CAGGCAGTTC AAGCGCCTGC GCAAGGTCCT CAAACGCCAG
CGCACGATCC TGGGCATCGT ACTGCGCGAG GTGCAGCGCA AGATCGGGCA AGCCAGCCAG
GCCACGGCGC CGGCGCTGGA GAATCTGCAC ACGCTGATGC AGCGCGCCGA GCGCATCCAT
GCTCAGCAAC CCAATGGCAA GAACAAACTC TATGCCCTGC ACGCGCCGGA AGTGGAGTGC
ATCGGCAAGG GCAAGGCGCG CAAGCCCTAC GAGTTCGGGG TGAAGGTCAG CGTGGCCATC
ACGCACAAAC AGGGCCTGAT GGTCGGCGCG CGCAGCTTCA CCGGCACCCC CTATGACGGC
CACACGTTGC ACGAGCAACT GGAGCAGGCC CGGATCCTGA GCGAGGACAC AGCAGGCGCA
CCTAAACAGG TGGTGGTGGA CCTGGGCTTT CGCGGTGTGG TGCGGCCAAT CCCGGCGTTG
AGATCATCCA CCGGGGCAAG TTCAAACGCC TGA
|
|---|
| Protein sequence | MAHTQNADFF RQPLAEMIDP RHPLAVLARR LPWAQIEAVL APHFARKVRA GRAVAQHDLF
GPSVQVAGAG IAAAGRPRLP IRLMASLLDL KHAYKLSDEE LVERWAQNVV WQHFSGMAFY
EPRLPCDATQ VGRFRAAIGE AGVEELLKAT IDTAVSSKAI VPAEFERLIV DTTVQEKAIA
HPVDWRLMEN ARHKLVAAAK RAGIALKQTF AKETKTLRRK AGGYAHARQF KRLRKVLKRQ
RTILGIVLRE VQRKIGQASQ ATAPALENLH TLMQRAERIH AQQPNGKNKL YALHAPEVEC
IGKGKARKPY EFGVKVSVAI THKQGLMVGA RSFTGTPYDG HTLHEQLEQA RILSEDTAGA
PKQVVVDLGF RGVVRPIPAL RSSTGASSNA
|
|---|
| |