| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00304 |
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| Symbol | upp |
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| ID | 6305565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 2098513 |
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| End bp | 2099235 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642639333 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_001913200 |
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| Protein GI | 188576271 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.115246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCTG CGTTCGCGAT CACGCCCAAT GTATGGCGAC ACACCGCGCG GCTGCGGCAC
ACTGCGCCCT TCGCCAGCCT GTCGCTACCC ATGAACATCG TCGAAGTCCG CCACCCCCTG
GTCCAGCACA AGATCGGCCT GCTGCGCGAC GCCTCCTTGA GCACCAAGGG CTTCCGCGAG
CTGGTCACCG AACTGGGCAC GCTGCTGGCC TACGAGGCCA CTGCCAATCT GGAGACCGAA
TCGCACACCC AGCCGGGCTG GGCCGGTCCG GTTAACGTGC AGCGCATTGC CGGCGCCAAG
ATCACCCTGG TCCCGATCCT GCGTGCCGGC CTGGGCATGT TGCCGGGCGT GCTGGCATTG
ATTCCCACCG CGCGCGTGAG CGTGGTCGGC TTGCAGCGCG ATGAAGAGAC CTTGCAGCCG
GTGCCTTACT TCGAACGCCT TACCGGCCGC CTGGAAGAAC GCGATGCCCT CATCCTGGAC
CCGATGCTGG CCACCGGCGG CACCCTGATT GCCACCATCG ACATGCTCAA GCGCGCCGGC
GCGCGGCGCA TCAAAGGCAT TTTTCTGGTC GCCGCACCGG AAGGCCTCAA GGCGCTGGAA
GCGGTGCATC CGGACGTGGA GGTCTACACC GCCGCCATCG ACGACCACCT CAACGACAAG
GGCTACATCC TGCCCGGCCT GGGCGATGCA GGCGATCGGA TCTTTGGCAC GCGGGTCGAG
TGA
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| Protein sequence | MTSAFAITPN VWRHTARLRH TAPFASLSLP MNIVEVRHPL VQHKIGLLRD ASLSTKGFRE
LVTELGTLLA YEATANLETE SHTQPGWAGP VNVQRIAGAK ITLVPILRAG LGMLPGVLAL
IPTARVSVVG LQRDEETLQP VPYFERLTGR LEERDALILD PMLATGGTLI ATIDMLKRAG
ARRIKGIFLV AAPEGLKALE AVHPDVEVYT AAIDDHLNDK GYILPGLGDA GDRIFGTRVE
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