Gene PXO_00281 details

Gene Information

• Locus tag: PXO_00281
• ID: 6305075
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 1572245
• End bp: 1572790
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 642638846
• Product: transposase
• Protein accession: YP_001912722
• Protein GI: 188575793
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2801] Transposase and inactivated derivatives

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCGGTAG GCGAGCGTGC ACCGTTGCTG CGGCCCACCA AGGCCAACCC GGTGTGGTCC 
ATGGACGTCG TGTTCGACCG CACCGCCGAA GGCAGGGCAA TCAAATGCCT GGTGATCGTG 
GACGACGCAA CCCACGAAGC GGTCGCCATC GACGTGGAGC GTGCGATCTC GGGACACGGC 
GTTGTGCGCG TGCTGGATCG GTTGGCACAC AGTCGTGGCC TGCCGAAGAT GATCCGCACC 
GACAACGGCA AGGAGTTCTG TGGCAAGGCC ATGGTCGCCT GGGCGCATGC CAATGGTGTG 
CAGCTACGCC AGATCCAGCC TGGCAAGCCG AACCAGAATG CCTACGTCGA ATCCTTCAAC 
GGCCGGCTAC GCGACGAATG CCTCAACGAA CACTGGTTCC CAACGCTGCT GCATGCGCGC 
ACCGAGATCG AACGCTGGCG CCGCGAATAC AACGAACACC GCCCCAAAAA AACAATCGGC 
GGAATGACGC CGGCGGCCTA TGCCCAGCAG TTGGCCCATA GCGATATCAT CAACCCCGGA 
CTCTAA 

 

Protein sequence

MPVGERAPLL RPTKANPVWS MDVVFDRTAE GRAIKCLVIV DDATHEAVAI DVERAISGHG 
VVRVLDRLAH SRGLPKMIRT DNGKEFCGKA MVAWAHANGV QLRQIQPGKP NQNAYVESFN 
GRLRDECLNE HWFPTLLHAR TEIERWRREY NEHRPKKTIG GMTPAAYAQQ LAHSDIINPG 
L