| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00270 |
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| Symbol | |
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| ID | 6305086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 1586899 |
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| End bp | 1589661 |
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| Gene Length | 2763 bp |
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| Protein Length | 920 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 642638857 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_001912733 |
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| Protein GI | 188575804 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCCGG TCGCCACAGT ACTTTCCGCC CTCAGCGCCG CCCCGCGGCA GCAAGAACGC
CTGCTGCGGT TGCATACCCC GCTTGGCCCC GACGTGCTGG TCGCCGAGAC GCTCGACGGC
CGCGAGTCGG TCGATGGCGG CGGCTTCCGT TTCGACGTGG GCGCACTATC GGCCAACGCC
GGCTTGCCGC TGGACGACCT GCTCGGCCAG CCGGTGCTGC TGGAACTGCT CACCGCCGAG
TCGCGCACCG CGCTGCGCCC GTTCCACGGC CATGTCACCG CGTTCGAACG CCTCGGCAGC
AACGGCGGCC TGGCGCGCTA CCGGCTGGTG GTGGAGCCGT GGCTGGCGCT GCTGGCCCAG
CGCGTGGACA GCTACGTGTT CCAGGACATG AGCGTGGTGG AGATCGCCGA GAGCGTGTTC
GCCGACTACG CCGGGCAAGG CGCGCTGGCG CCGGCGTGGC GCTGGGAGCT GTCCGACCGC
AGCACGTACG CCAGGCGCAG CCTGACCACG CAATACGAAG AGACCGACTT CGCGTTCCTG
AGCCGGCTGC TGGCCGAGGA AGGCATCGCC TATTGGTTCG AGCACACCGG CGCAGCCGAC
AGCGCCACGC GCGGCACGCA CACGCTGGTG CTGTCGGACC ATAACGCCGC CTTCGCCGAC
CTGGGCACGG TGCGCTACCA CCGCACCGAC GTCACCGAGC AGCAGGACAG CGTGCAGCAG
TGGGTACAGG CACATCGCTG GCGCGCGACC AGTCTGTCGC GGGCCAGCTG GGACTACCGC
AACCGCAGCC TGCGCCTGGC CGGTGCCGAA GGCACGCCGC TGGGCGACAT CGGTGCCGAG
GACGTGGACA CCGCCGGCCC GTACGGCTGG CAGGACAGCA CCCGTGGCCA GCGCCGCGCG
CAGCAGCATC TGGATGCGCA GCAGGTGACG GCGCAGACCA TCCAGGGCCA GGGGACCTGG
CGGCAACTGG CACCGGGCAC GCGTTTCGGG CTGCGCCAGC ATGCGGTCGT GGCGGCCGAT
GCGCAGTTCC TGTGCCTGCA GGTGCGGCAC CAGGCGCGCA ACAATCTGGG CGCGGAGGTG
TTCGACGCGC TGGAGCAGGC GCTGGGCGCG GTGGCGGTGG CCGGCGCGCC GCTGCCGCCG
GCGCTGGCAG GCCTGAGCGG CGGATATGTG CCGGCGCAGG ATGAGGCGGC GGTAGAGTTC
TACCGCAACC AGTTCACCGC CATACCGGCC ACCGCGACCT ACCGGCCGCA AACCGAGGAC
GGCCACGGCG TGCGCCTGCA TCCCAAGCCA ACGGTCGTCG GCACGCTGAG CGCGATCGTG
GTCAGCGACG GCGACCCGGT GCAGTCCGAC CGCGACCACC GGATCAAGGT GCAGTTCCCG
TTCCAGCGCG GGGCCGACGC CAGCAGCGCG CTGGCGCATC CCGGGGGCGA GGACAACGCG
CCGGGCAGCG CCTCGGCGTG GACCTGGGTG CGGGTGATGA CGCCGTGGGC CGGGGACAAC
TGGGGCGGCG TGGTGCTGCC GCGCAAGGGC CAGGAAGTGC TGGTGGGGTT CCTGGAAGGG
GACATCGACC GGCCGGTGGT GATCGGCAGC GTGTACAACG GGCGCGGCCA GGACGACGCG
GCGCACAACC AGGTCGGCGG CGGCGGGGCC GGAGCCACCG GCAATGCGCC GGCGTGGTTC
CAGGGCAACG CGCACGGCGC GGTGTTCACC GGGTTCAAGA GCCAGGCGCT GGCGCAGAGC
CAGGACGGCA CCGGCGGCTA CCAGCAGCTG CGGCTGGACG ACACGCCCGG CCAGGGCCGC
GCGCAGCTGT CGACCACCCA GCACGCCAGC ACCTTGACCC TGGGCCACCT GAAGGGCGGC
CACGACAACC TGCGCGAAGG CGAGCGCGGG TACGGGGCGG ACCTGTCCAC GCAGGCCTAC
GGCGCGGTGC GCGCCGGCCA GGGCCTGCTG CTGAGCAGCG AGCCGGGCAA CACCCAACTG
GCCGCCACCG GCGCGCTGAG CCAACTGCAG CAGGGCAGCG ACCTGCTCAA GCGCCTCAAC
GACGCCGCCC GCACCCAGCA GGCGGGCCTA CCGAGCGAAC CGGAGTCCCT GCCGACCCAG
GACGGCCTGA AGACCTTGCA GGACCACCTG CAGGCCACCC ACAGCGGCAG CGCGGCCGGC
GCGATCGGCG GTGGCACCGG CGAGGTGCCC GGCTGGAGCG CCCCAGTGCT GCTGGGCAGC
GGCCAGGCCG GCGTGATGAG CCTGACCCCG GCCGACCAGG TGTGGGTGTC GGGCACCCAG
ACCGCGCTGC TGGCCGGCAG CGCACTGAAC TGGCTCAGCC AGGGCCACCT GGTGCTGGCG
GTGGCCGGCG GGCTGGTGCT GTACACCCAG GGCAGCGACC CGGTCGCCGG CAGCCCCAAC
CAGGAGCGCG GCATCGCCCT GCACGCCGCG CAAGGCACGC TCAGCGCTCG CGCGCACAGG
AGCACCGCCA CCCTGGCCGC CAAGACCCAG GTGCGCATCG TCAGCACCAC CGCCGACGTC
CAGCTCGCCG CGCCGACCAA GCACCTGCTG GCCACCGCGG CCGGCGCCTA CATCAAGCTG
GACGGCGACG ATATCGAACT GGGCGCGCCG GGGGTGGTCG CGTTCAAGGG CGGGCAGCAG
GTGTTGACCG GGCCGCAGGG CAGCACCGCG TCGGTGTCCA TCCCGCAGGC GCAGTTCAAG
GGCTGCGATC CGACATTGGT CAATGCGCAG CTTCGCTCCG AAGCCGCCGC AGACCTAGGG
TGA
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| Protein sequence | MDPVATVLSA LSAAPRQQER LLRLHTPLGP DVLVAETLDG RESVDGGGFR FDVGALSANA
GLPLDDLLGQ PVLLELLTAE SRTALRPFHG HVTAFERLGS NGGLARYRLV VEPWLALLAQ
RVDSYVFQDM SVVEIAESVF ADYAGQGALA PAWRWELSDR STYARRSLTT QYEETDFAFL
SRLLAEEGIA YWFEHTGAAD SATRGTHTLV LSDHNAAFAD LGTVRYHRTD VTEQQDSVQQ
WVQAHRWRAT SLSRASWDYR NRSLRLAGAE GTPLGDIGAE DVDTAGPYGW QDSTRGQRRA
QQHLDAQQVT AQTIQGQGTW RQLAPGTRFG LRQHAVVAAD AQFLCLQVRH QARNNLGAEV
FDALEQALGA VAVAGAPLPP ALAGLSGGYV PAQDEAAVEF YRNQFTAIPA TATYRPQTED
GHGVRLHPKP TVVGTLSAIV VSDGDPVQSD RDHRIKVQFP FQRGADASSA LAHPGGEDNA
PGSASAWTWV RVMTPWAGDN WGGVVLPRKG QEVLVGFLEG DIDRPVVIGS VYNGRGQDDA
AHNQVGGGGA GATGNAPAWF QGNAHGAVFT GFKSQALAQS QDGTGGYQQL RLDDTPGQGR
AQLSTTQHAS TLTLGHLKGG HDNLREGERG YGADLSTQAY GAVRAGQGLL LSSEPGNTQL
AATGALSQLQ QGSDLLKRLN DAARTQQAGL PSEPESLPTQ DGLKTLQDHL QATHSGSAAG
AIGGGTGEVP GWSAPVLLGS GQAGVMSLTP ADQVWVSGTQ TALLAGSALN WLSQGHLVLA
VAGGLVLYTQ GSDPVAGSPN QERGIALHAA QGTLSARAHR STATLAAKTQ VRIVSTTADV
QLAAPTKHLL ATAAGAYIKL DGDDIELGAP GVVAFKGGQQ VLTGPQGSTA SVSIPQAQFK
GCDPTLVNAQ LRSEAAADLG
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