| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00265 |
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| Symbol | sciI |
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| ID | 6305091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1593051 |
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| End bp | 1594553 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642638862 |
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| Product | SciI protein |
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| Protein accession | YP_001912738 |
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| Protein GI | 188575809 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGACCC AACATTCCGC TGCCCAAGAC CTTGCCGAAG CGCAGCCGCA AACCAGTCAG
ACCGACGACT TTGCGGCCCT GCTGACCCGC GAATTCCGTC CGCGTAGCGA ACGCGCCGGC
GAAGAAGTGC GGTTGGCTGT GCGCACCTTG GCCGAACAGG TGCTGGAACG CAGCGACATC
ATCAGCGACG ACCTCGCGCA GACAATCAAC GCGTATGTCG CCGAGATCGA CCGCAAGATC
AGCGAGCAAC TCAACCTCAT CCTGCACGCC CCGCAATTCC AGGCGCTGGA GGGTGCATGG
CGCGGACTGC ATTATCTGGT CAGCAACACC GAATCGGACA CGCAGTTGAA GATCCGCGTG
CTCAACGTGT CCAAAAGGGA GCTCGCCAAG AACCTCAAGC GCTTCAAGGG CACCGCCTGG
GACCAGAGCC CGGTATTCAA GAAAATTTAC GAAGCCGAGT ACGGCCAGCT GGGTGGCGAA
CCCTACGGCT GTTTGATTGG CGATTACCAC TTCGACCATA GCCCGCAGGA TGTCGACACG
CTGCGCGGCA TCAGCCAGAT TGCCGCCGCC TCGCATGCGC CTTTCATCGC CGCTGCGGGT
CCTGGCCTGA TGGGGATGGA AAGCTGGAGC GAGCTGTCCA ACCCGCGCGA TCTGGCCAAG
ATTTTTTCCA CCCCCGATTA CGCGGCTTGG CGTTCGTTGC GTCAGAGCGA GGATGCCAAG
TACCTGGCGC TTGCCATGCC GCGCACGCTG GCGCGGCTGC CGTACGGAGT CAAGACCGAT
CCGGTGGAAG CGTTCGACTT CGAAGAAGAC ACCCAGGGCG CCGATTCGTC GTGCTACACC
TGGCAAAACG CCGCCTACGC GATGGCGGTC AACATCAACC GCTCCTTCAA GCAGTACGGT
TGGTGCACCC GCATTCGCGG CGTGGAGTCG GGTGGGGCGG TGGAAGGCCT GCCGACGCAT
ACCTTCCCGG CCGACGATGG CGGTGTGGAC ATGAAGTGCC CGACCGAGGT CGCGATTACC
GACCGCCGTT CGGCCGAACT CGACAAGATG GGTCTGATGC CGCTGGTACA TCGCAAGAAC
ACCGATATGG CAGCCTTCAT CAGCGCGCAG TCGCTGGGCA AGCCCGAGGA ATACGACGAC
CCGGATGCCA CCGCCAACGC GGCGCTGAGC GCACGCCTGC CGTATATGTT CGCTTGCTGC
CGCTTCGCGC ACTATTTGAA GTGCATCGTG CGCGACAAGA TCGGCTCGTT CAGCACGCGC
CAGCAGATGC AGAGCTGGTT GACCGATTGG GTGATGAACT ACGTCGACGG CGACCCGGCC
AATTCCAGCG AAGAAACCAA GGCGCGTAAG CCATTGGCTG CTGCCGAAGT GGTCGTCGAA
GAGGTCGAGG GCAACCCCGG CTACTACACC TCCAAGTTCT TCCTGCGCCC GCATTACCAG
CTCGAAGGCC TGACGGTATC GCTACGCCTG GTCTCGCGCT TGCCATCGGC GCAGGCAGCC
TGA
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| Protein sequence | MVTQHSAAQD LAEAQPQTSQ TDDFAALLTR EFRPRSERAG EEVRLAVRTL AEQVLERSDI
ISDDLAQTIN AYVAEIDRKI SEQLNLILHA PQFQALEGAW RGLHYLVSNT ESDTQLKIRV
LNVSKRELAK NLKRFKGTAW DQSPVFKKIY EAEYGQLGGE PYGCLIGDYH FDHSPQDVDT
LRGISQIAAA SHAPFIAAAG PGLMGMESWS ELSNPRDLAK IFSTPDYAAW RSLRQSEDAK
YLALAMPRTL ARLPYGVKTD PVEAFDFEED TQGADSSCYT WQNAAYAMAV NINRSFKQYG
WCTRIRGVES GGAVEGLPTH TFPADDGGVD MKCPTEVAIT DRRSAELDKM GLMPLVHRKN
TDMAAFISAQ SLGKPEEYDD PDATANAALS ARLPYMFACC RFAHYLKCIV RDKIGSFSTR
QQMQSWLTDW VMNYVDGDPA NSSEETKARK PLAAAEVVVE EVEGNPGYYT SKFFLRPHYQ
LEGLTVSLRL VSRLPSAQAA
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