Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00252 |
Symbol | impJ |
ID | 6305103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1608357 |
End bp | 1609694 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642638874 |
Product | ImpJ |
Protein accession | YP_001912750 |
Protein GI | 188575821 |
COG category | [S] Function unknown |
COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCCTT ACAACAAGGT GATCTGGAGC GAGGGCCTGT TCCTGCGCCC GCAGCACCTG CAACAACAGG AGCGCTATCT GGAGCGCTAC ATGGAACTGC ATGCCGGTGC GCTCCGGCCG CATGCGTGGG GTTTCAGCGT ACTGGAGCTG GAGCCGGAAT TGCTGTCCAT CGGCAAGCTC GGCATCCGGC GCGCCCGCGG CTGCTTTCCC GATGGCACGC CGTTTTCCAT TCCCGATCGC GATCCGGCAC CGCCGCCGTT GGACGTGCCG GCCAACTGCC GCGACCAGGT GGTGAGTCTG GCGCTGCCGC TGCGCGCGAC CACGCAGCCC GATAGCACCT GGCCGGATGG CGACGGCAGC CGGCTGGCCC GTTATCGCGT GGGCGAAGCG GAGGTCGGCG ATTCGTCCGG CAGCATCGCC GGCACGGTCC TGCTGGAAGT CGGCGTGCTG GCCAGTCGCC TACGCCTGCA GTCCGAACCG GGGGAGGGGC TGGTGGAGGT GCCGATGGCG CGCATTGTCG AGTGCCGCGC CGATCGACGG GTGATTCTCG ATGATGCCTT CATCCCGACC GCCATCCGCA TCGAAGGCGC CGCGCGGTTG TCCATGCTGC TGGCCGAATT GCTTGGGCTA TTGCATCAAC GCGGCCAGGC GCTGGCCGAC CGCGTGGCCG GCAGCGACCG TCGCGGCGTG GCGGAAATCG CAGACGTGCT GATGTTGCAG GTGATCAATC GCTACCAGCC GCTGGTGGCG CATTGGGCAA GCGCGCCGCT GGAGCATCCG GAAGCGCTGT ATTGCGTGCT GCTGGGGATG GCTGGCGAAC TCGCGACCTT CACCCGTGCC AGTAAACGCA GCGGGCCATT TCCGCCGTAC GCACACGATG CGCTGCAGGC GAGCTTCGAG CCGGTGGTGG TGTCCTTGCG CGAAAGCTTG AGCGCGGTGC TCGAACAGTC GGCGATTGCC GTGCCCTTGC AGCAACGCAA ATACGGCGTG TGGGTGGGCA TGGTGCCCGA TCCGGCCTTG CTGGACGCGG CGGCCTTCGT GCTGGCAGTC AAGGCGGATC TGCGCGCCGA GGATCTGCGC AAGCGGCTAC CCGCCGAATC GAAGATCGGC CCGGTGGAGA AGATTCGCGA CCTGGTGAAC CTGCAACTGC CCGGGGTGGC CGTGAGTGCG CTGGCGATGG CACCGCGGCA GGTGCCGTAT CACGCCGGCT GCGCCTACTT CGAACTCGAT CGGCAATCGT CGCTGTGGAA GACGCTGCGC ACGTCCGGTG GCGTGGCGCT GCATTTCGGC AGTGGTTTTC CCGGCCTGGA ACTTGAGTTG TGGGCGGTGA GGAATTGA
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Protein sequence | MTPYNKVIWS EGLFLRPQHL QQQERYLERY MELHAGALRP HAWGFSVLEL EPELLSIGKL GIRRARGCFP DGTPFSIPDR DPAPPPLDVP ANCRDQVVSL ALPLRATTQP DSTWPDGDGS RLARYRVGEA EVGDSSGSIA GTVLLEVGVL ASRLRLQSEP GEGLVEVPMA RIVECRADRR VILDDAFIPT AIRIEGAARL SMLLAELLGL LHQRGQALAD RVAGSDRRGV AEIADVLMLQ VINRYQPLVA HWASAPLEHP EALYCVLLGM AGELATFTRA SKRSGPFPPY AHDALQASFE PVVVSLRESL SAVLEQSAIA VPLQQRKYGV WVGMVPDPAL LDAAAFVLAV KADLRAEDLR KRLPAESKIG PVEKIRDLVN LQLPGVAVSA LAMAPRQVPY HAGCAYFELD RQSSLWKTLR TSGGVALHFG SGFPGLELEL WAVRN
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