Gene PXO_00196 details

Gene Information

• Locus tag: PXO_00196
• ID: 6305157
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 1676288
• End bp: 1676986
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 642638928
• Product: biotin synthesis protein
• Protein accession: YP_001912804
• Protein GI: 188575875
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.505545
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCGCAG TGCCGGTCCT CGAACCCGCC GCGGCATATG CGCTGTGGGC GCAGGCGTAT 
CCGCCGCACG CGCACAACCC GGTGATGCTG GCCGAAGAAC GCGCCATGCT CGACTTGATG 
CCGGCCAGCC TGCAGGGCCA GCACGTGCTG GACGCCGGTT GCGGCAGCGG CCGCTACATG 
CTGCACGCAT TGCGCCGCGG CGCAAGGCAT GTCACCGGTG TCGATCTGTC GCCGCAGATG 
CTGCAACGTG CCGGCGCCGA GCTGGCGCAG GAGTGGCAGG CCGCGCGGAT TGGCTTGCAA 
CAAGGCAGGC TGGATCAGTT GCCGATGCCC GATGCGGTAG CCGACCTCAG CGTGTGCGGT 
CTGGTGGTGG GGCATCTGCA ACGGCTGTGG CCCGCCCTGG AAGAACTGCA TCGCGTCACC 
CGCGTCGGCG GCATCGTGCT GTGCAGCGAC GTGCATCCGA TCGGCCACGC GCTGGGCTGG 
CGACGCGATT TCAAAGCGGA CCGGCAGCAC TACGCTGTGC GGCATACGCA ACATCTCTAC 
AGCCACTGGC ATTCGGCGTG CACCGCACTC GGCTTCGCAA TCGAAGCCGT TGCCGAGCCG 
ATGCTGGACC CTGCGGATAT TCCGGCCGGT GCGCGTTTCG ACCAGACGGC GTTGCAGGTG 
CCGGTTGCGC TGGTGCTGCG GCTGCGACGC GTCGCGTGA 

 

Protein sequence

MSAVPVLEPA AAYALWAQAY PPHAHNPVML AEERAMLDLM PASLQGQHVL DAGCGSGRYM 
LHALRRGARH VTGVDLSPQM LQRAGAELAQ EWQAARIGLQ QGRLDQLPMP DAVADLSVCG 
LVVGHLQRLW PALEELHRVT RVGGIVLCSD VHPIGHALGW RRDFKADRQH YAVRHTQHLY 
SHWHSACTAL GFAIEAVAEP MLDPADIPAG ARFDQTALQV PVALVLRLRR VA