Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00184 |
Symbol | exoD |
ID | 6305168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 1689403 |
End bp | 1690020 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642638939 |
Product | ExoD protein |
Protein accession | YP_001912815 |
Protein GI | 188575886 |
COG category | [R] General function prediction only |
COG ID | [COG3932] Uncharacterized ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.358269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTACC GCAACGAACG CATTCGCAGC TTGCTGGCGG CCTTCAGCGA GAGAGACCCG GACCAGGTGT TACGTGTCCG CCAGATCCTG GCCGATCTGC AACAAAGCGC CTTCGGCGTA TTTTTGTTTC TGGCGATCCT GCCCTCGTTC ATCCCGATTC CCGGCGTTGC CGGTGGCATC AGCGGACCAC TGACGATACT GATCGGGCTG CAGATGATGT GCTGCCTGCG CAAGCCGTGG GTAACGCGCT TCATCGGCGA GCGTGGGCCG CGCCGTCGCA CCAGCCAGCG TTTCGTCTCC ACATTCGGGC CGACAATGCA GCGCCTGGAT CGCCTGCTCA AACCGCGTCT GCACGGCATG CTGGACAGGA TGCCGGCGCA AGTATTCACC GGCCTGCTGC TGGTACTGAT CGGCAGTTTG CTGACGCTGC CGATCCCGTT CACCAACTAT CTTTTCGGAT TGATCCTGCT GCTATTTGCC CTGGCCCTGC TCGAGCGCGA TGGCGCGCTG ATGCTGGCGG GCTGGGCCGC CGCGCTGATC TCGGTGGCCG TCTTCGGCGT CACTTCCGAC CAGCTGGTAG ACCTGATTCG CGACTGGTGG CCGGACGCCT GGCGCTGA
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Protein sequence | MRYRNERIRS LLAAFSERDP DQVLRVRQIL ADLQQSAFGV FLFLAILPSF IPIPGVAGGI SGPLTILIGL QMMCCLRKPW VTRFIGERGP RRRTSQRFVS TFGPTMQRLD RLLKPRLHGM LDRMPAQVFT GLLLVLIGSL LTLPIPFTNY LFGLILLLFA LALLERDGAL MLAGWAAALI SVAVFGVTSD QLVDLIRDWW PDAWR
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