Gene PXO_00177 details

Gene Information

• Locus tag: PXO_00177
• Symbol: parE
• ID: 6305175
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: -
• Start bp: 1697066
• End bp: 1698955
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642638946
• Product: DNA topoisomerase IV subunit B
• Protein accession: YP_001912822
• Protein GI: 188575893
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.771486
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACACCC GTTATAACGC CGCCGACATT GAAGTGCTGT CGGGCCTGGA CCCGGTCAAA 
CGCCGTCCTG GCATGTACAC CGACACCGCG CGCCCGAACC ATCTGGCGCA GGAAGTGATC 
GACAACTCGG TCGACGAGGC GCTGGCCGGT CACGCCAAGC AGATCGAAGT CACCTTGTAC 
AAGGACGGCA GCTGCGAGGT GTCCGACGAC GGCCGCGGCA TGCCGGTGGA CATCCATCCG 
GAAGAGAAGA TTCCGGGTGT GGAGTTGATC CTGACCCGGC TGCATGCCGG CGGCAAGTTC 
AACAACCGCA ATTACACCTT CTCCGGCGGC CTGCATGGCG TGGGTGTGAG CGTGGTCAAT 
GCGTTGTCGA CCAAGGTCGA GCTGTTCATC AAGCGCGAAG GCAGCGAACA CCGCATGGAG 
TTCCGCGACG GCAATGCCGC GTCCAAGCTG GAAGTGGTCG GCACGGTCGG CAAGAAAAAC 
ACCGGCACGC GGCTGCGTTT CTGGGCCGAC CCCAAGTATT TCGATACGCC CAAATTCAAC 
GTGCGTGCGC TGCGGCATCT GCTGCGCGCC AAGGCGGTGC TGTGCCCCGG CCTGACCGTG 
AAGCTGCACG ACGAAGCCAC CGGCGAGCAG GACAGCTGGT ATTTCGAAAA CGGCCTGCGC 
GATTACCTCA AAGGCGAGAT GGCCGAGCAC GAGATGCTGC CGGCCGACCT GTTCGTCGGT 
AGCCTGAAAA AAGACACCGA AATCGTCGAC TGGGCCGCAG GCTGGGTGCC GGAAGGCGAG 
CTGGTGCAGG AAAGCTACGT CAACCTGATC CCCACCGCGC AGCACGGCAC CCACGTCAAC 
GGCCTGCGGT CGGGCCTGAC CGATGCGCTG CGCGAGTTCT GCGATTTCCG CAATCTGCTG 
CCACGCGGCG TCAAGCTGGC GCCGGAAGAC GTGTGGGACC GGGTCACCTT CGTGCTCAGC 
CTGAAGATGA CCGACCCGCA ATTCTCCGGG CAGACCAAGG AACGCCTGTC CTCGCGTCAG 
GCCGCCGGCT TCATCGAAGG TGCTGCGCAC GATGCCTTCA GCCTGTATCT GAATCAGAAC 
GTGGAAATCG GCGAGAAGAT CGCGCAGATC GCCATCGACC GCGCCAGCGC ACGGTTGAAG 
ACCGAGAAGC AGATCGTCCG CAAGAAGGTC ACCCAGGGCC CGGCCCTGCC CGGCAAGCTG 
GCCGATTGCA TCAGCCAGGA TCTGTCCCGT ACCGAATTGT TCCTGGTCGA AGGCGATTCG 
GCCGGTGGCT CGGCCAAGCA GGCGCGCGAC AAGGACTTCC AGGCGATCCT GCCGCTGCGT 
GGCAAGATCC TCAATACCTG GGAAGTGGCT TCCGGCAGCG TGCTGGCCTC CGAAGAAGTG 
CATAACTTGG CGATCGCGAT CGGCTGCGAC CCGGGCAAGG ACGACATCAC CGGGCTGCGC 
TACGGCAAGG TGGTGATCCT GGCCGACGCC GACTCCGACG GCCTGCATAT CGCCACGCTG 
CTGACGGCGC TGTTCCTGCA GCACTTCCCC GCGCTGGTGG CCGCCGGCCA CGTGTTCGTG 
GCGATGCCGC CGCTGTTCCG CGTGGACGTG GGCAAGCAGG TGTTCTACGC GCTGGACGAA 
GAAGAAAAGA CCACGCTGCT GGACAAGATC GCGCGCGAGA AGATGAAGGG CCAGATCAGC 
GTCACCCGCT TCAAGGGCCT GGGCGAAATG AATCCGCAGC AGCTGCGCGA ATCCACCATC 
CACCCGGACA CACGACGGCT GGTGCAGCTG ACCATCGATG ATGGCGAGCA GACGCGTTTG 
TTGATGGACA TGCTGCTGGC CAAGAAGCGC GCAAGCGACC GCAAGCAGTG GCTGGAAACC 
AAGGGCGATC TGGCTTCGCT GGAAGTTTGA 

 

Protein sequence

MNTRYNAADI EVLSGLDPVK RRPGMYTDTA RPNHLAQEVI DNSVDEALAG HAKQIEVTLY 
KDGSCEVSDD GRGMPVDIHP EEKIPGVELI LTRLHAGGKF NNRNYTFSGG LHGVGVSVVN 
ALSTKVELFI KREGSEHRME FRDGNAASKL EVVGTVGKKN TGTRLRFWAD PKYFDTPKFN 
VRALRHLLRA KAVLCPGLTV KLHDEATGEQ DSWYFENGLR DYLKGEMAEH EMLPADLFVG 
SLKKDTEIVD WAAGWVPEGE LVQESYVNLI PTAQHGTHVN GLRSGLTDAL REFCDFRNLL 
PRGVKLAPED VWDRVTFVLS LKMTDPQFSG QTKERLSSRQ AAGFIEGAAH DAFSLYLNQN 
VEIGEKIAQI AIDRASARLK TEKQIVRKKV TQGPALPGKL ADCISQDLSR TELFLVEGDS 
AGGSAKQARD KDFQAILPLR GKILNTWEVA SGSVLASEEV HNLAIAIGCD PGKDDITGLR 
YGKVVILADA DSDGLHIATL LTALFLQHFP ALVAAGHVFV AMPPLFRVDV GKQVFYALDE 
EEKTTLLDKI AREKMKGQIS VTRFKGLGEM NPQQLRESTI HPDTRRLVQL TIDDGEQTRL 
LMDMLLAKKR ASDRKQWLET KGDLASLEV