| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00173 |
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| Symbol | kdsA |
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| ID | 6305179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1701405 |
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| End bp | 1702235 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642638950 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | YP_001912826 |
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| Protein GI | 188575897 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.12468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGT GTGGCTTTGA AGTTGGCCTG GATCAGCCGT TGTTCCTGAT CGCCGGCCCC
TGCGTGATCG AGTCGATGCA GCTGCAGCTC GACGTGGCCG GCAAGCTCAA GGAGATCACC
GGCAAGCTCG GTGTCAACTT CATCTTCAAG TCGAGTTTCG ACAAGGCCAA CCGCACCTCC
GGCACCAGCT TCCGTGGCCC GGGCCTGGAA GAAGGCCTCA AGGTGCTGGA TGCGGTGAAG
CGGCAGATCG GCGTGCCGGT ACTCACCGAC GTGCACGAAT ACACCCCGAT GAACGAGGTC
GCGGCCGTCG TCGACGTGTT GCAGACCCCT GCCTTCCTGG TGCGGCAGAC CGATTTCATC
AAGAACGTCT GCGCCGCCGG CAAGCCGGTC AACATCAAGA AGGGGCAGTT CCTGGCGCCT
TGGGACATGA AGCCGGTGGT GGACAAGGCC AAGTCCACCG GCAACGCGCA GATCATGGTC
TGCGAGCGTG GCGCCTCGTT CGGCTACAAC AATCTGGTCA GCGACATGCG CTCGCTGAGC
GTGATGCGCG ACACCGGCTG TCCGGTGGTG TTTGATGCGA CCCATTCGGT GCAGTTGCCG
GGCGGGCAGG GCAGCAGCTC TGGCGGCCAG CGCGAGTTCG TGCCGGTGCT GGCGCGCGCT
GCGGTGGCGG TCGGTATTTC GGGTCTGTTT GCCGAAACCC ACCCGGATCC ATCCAAGGCG
CTGTCCGATG GCCCCAACGC GTGGCCGCTG GATCGCATGG AAGAACTGCT CGAAACCCTG
ATGGAACTGG ATGCCGTCAC CAAGAAACAC GGGTTCGCGC GCTTCGCATG A
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| Protein sequence | MKLCGFEVGL DQPLFLIAGP CVIESMQLQL DVAGKLKEIT GKLGVNFIFK SSFDKANRTS
GTSFRGPGLE EGLKVLDAVK RQIGVPVLTD VHEYTPMNEV AAVVDVLQTP AFLVRQTDFI
KNVCAAGKPV NIKKGQFLAP WDMKPVVDKA KSTGNAQIMV CERGASFGYN NLVSDMRSLS
VMRDTGCPVV FDATHSVQLP GGQGSSSGGQ REFVPVLARA AVAVGISGLF AETHPDPSKA
LSDGPNAWPL DRMEELLETL MELDAVTKKH GFARFA
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