Gene PXO_00168 details

Gene Information

• Locus tag: PXO_00168
• Symbol: ispF
• ID: 6305184
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 1705351
• End bp: 1705842
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642638955
• Product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_001912831
• Protein GI: 188575902
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.194703
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCTTCA ATTTCCGAAT CGGCCAAGGC TACGACGTGC ATGCGTTCGG CCCTGGCGAG 
CACGTGATGC TTGGCGGCGT GCGCGTGGCG CACAGTCACG GCGTACTTGC GCATAGCGAC 
GGCGATGTGG TGTTGCACGC ACTGTGCGAT GCGATGCTGG GTGCGTTGGC GCTGGGCGAC 
ATCGGCCGGC ATTTTCCGCC GTCCGACGAA CGCTGGAAGG ATGCCGACAG CGCGCAGTTT 
CTGCAGCATT GCGATGGCTT GCTGCGCGAG CGCGGCTGGC GCGTCGGCAA TGCCGACATC 
ACCGTGATCT GCGAGCGCCC CAAGGTCGGA CCGCATGCGG TGGCCATGCG CGAGCGCATC 
GCCGGCCTGT TGGCGATCGA ACTCGATGCG GTCAGCGTCA AGGCCACCAC CAGCGAACAA 
TTGGGCTTCA CCGGCCGCGG CGAAGGCATC GCTGCACAGG CTGCAGTGCT GCTGGGCAGG 
ATCGCTGCAT AA 

 

Protein sequence

MSFNFRIGQG YDVHAFGPGE HVMLGGVRVA HSHGVLAHSD GDVVLHALCD AMLGALALGD 
IGRHFPPSDE RWKDADSAQF LQHCDGLLRE RGWRVGNADI TVICERPKVG PHAVAMRERI 
AGLLAIELDA VSVKATTSEQ LGFTGRGEGI AAQAAVLLGR IAA