Gene PXO_00163 details

Gene Information

• Locus tag: PXO_00163
• ID: 6305189
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 1709703
• End bp: 1710317
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642638960
• Product: lipoprotein
• Protein accession: YP_001912836
• Protein GI: 188575907
• COG category: [S] Function unknown
• COG ID: [COG1238] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.193393
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATTT TCGGTCCGTT GTACGACGTG GCCATCCGTT GGTCGCGCCA TCGCCGCGCC 
CCCACGCTGT TGACCGGTCT CAGCTTCGTA GAGGGTTTCA TCTTCCCTGT GCCGCCGGAA 
GTGATGCTGG CACCGATGTC GCTGGCCGAG CCAAAGCGTT CGTTGTGGTT CGCCACCTTG 
AGTCTGCTGG GATCGGTCTG CGGCGCATTG GTCGGTTATC TACTCGGCCA TTTCGCGTTT 
GCGGCGTTGC AGCCGTTGAT CGAGTGGCTG GGCTGGAGCG CGAAGATCCA GCAGCAGATC 
GAAACGCTGC GCACGCTGGT CGCCGATTCG CCGTGGAAGG CATTCTGGGC GCTGGTCCTG 
GTGGGTTTCA CTCCGATTCC GCTGAAGATC TTCACCTGGG CATCGGGCGT GGTCGGCGTG 
CCGATCCTGC CGTTCATCGC CAGCATGTTG GTGGGACGCG GCAAGCGCGT GTATCTGGTT 
GCCGGTGCGA TCCGCCTGGG TGGTGCGCGT GCCGAGGCGG CGCTGCATCG CTGGATCGAG 
CCGCTGGGCT GGGTTGCGAT GGCGGTGCTG GCGGTAGGTG CAGGGTGGCT GGTGTGGAAG 
ACAACGAACG GATGA 

 

Protein sequence

MKIFGPLYDV AIRWSRHRRA PTLLTGLSFV EGFIFPVPPE VMLAPMSLAE PKRSLWFATL 
SLLGSVCGAL VGYLLGHFAF AALQPLIEWL GWSAKIQQQI ETLRTLVADS PWKAFWALVL 
VGFTPIPLKI FTWASGVVGV PILPFIASML VGRGKRVYLV AGAIRLGGAR AEAALHRWIE 
PLGWVAMAVL AVGAGWLVWK TTNG